Pairwise Alignments

Query, 233 a.a., ribosomal protein L1 (RefSeq) from Shewanella loihica PV-4

Subject, 213 a.a., 50S ribosomal protein L1 from Methanococcus maripaludis S2

 Score = 70.1 bits (170), Expect = 3e-17
 Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 24/221 (10%)

Query: 20  SYDINEAVALLKELATAK-FVESVDVAVNLG-VDPRKSDQNVRGATVLPHGTGREVRVAV 77
           S  I  AV   + LA  + F +SVD+ VNL  +D  + +  ++   VLP G G++V +AV
Sbjct: 3   SEKILNAVKEARTLAKPRNFTQSVDLIVNLKELDLSRPENRLKEQIVLPSGRGKDVAIAV 62

Query: 78  FTQGANADAAKEAGAELVGMDEL--------AAQVKAGEMNFDVVIASPDAMRVVGQ-LG 128
             +G  A  A++ G  ++  +EL         A+  A    F   IA  D M +VG+ LG
Sbjct: 63  IAKGDLAAQAEDMGLTVIRQEELEELGKNKKTAKKIANAHGF--FIAQADMMPLVGKSLG 120

Query: 129 QILGPRGLMPN--PKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFEPVQLK 186
            +LGPRG MP   P    + P VA   K      V        +    IG       +L 
Sbjct: 121 PVLGPRGKMPQPVPANANLAPLVARFQKT-----VAINTRDKALFQVYIGTESMSDDELA 175

Query: 187 ENLDALLGALIKAKPAAAKGVF-VKKVSISTTMGAGVAVDQ 226
            N +A+L  + K      KG++ VK      TMGA   +++
Sbjct: 176 ANAEAILNVVSK---KYEKGLYHVKNAFTKLTMGAAAPIEK 213