Pairwise Alignments

Query, 233 a.a., ribosomal protein L1 (RefSeq) from Shewanella loihica PV-4

Subject, 232 a.a., 50S ribosomal protein L1 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  240 bits (613), Expect = 1e-68
 Identities = 116/230 (50%), Positives = 161/230 (70%)

Query: 1   MAKLTKRARLIREKVEATKSYDINEAVALLKELATAKFVESVDVAVNLGVDPRKSDQNVR 60
           M KLTK  +L  EK+EA K+Y + EA +L+KE+   KF  S+D+ V LGVDPRK++Q VR
Sbjct: 1   MGKLTKNQKLAAEKIEAGKAYSLKEAASLVKEITFTKFDASLDIDVRLGVDPRKANQMVR 60

Query: 61  GATVLPHGTGREVRVAVFTQGANADAAKEAGAELVGMDELAAQVKAGEMNFDVVIASPDA 120
           G   LPHGTG+EVRV V        AAKEAGA+ VG+DE   ++K G  + DV+I  P  
Sbjct: 61  GVVSLPHGTGKEVRVLVLCTPDAEAAAKEAGADYVGLDEYIEKIKGGWTDIDVIITMPSI 120

Query: 121 MRVVGQLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDF 180
           M  +G LG++LGPRGLMPNPK+GTVT +VA+AVK  K G++ ++ DK+GI+HT+IGKV F
Sbjct: 121 MGKIGALGRVLGPRGLMPNPKSGTVTMDVAKAVKEVKQGKIDFKVDKSGIVHTSIGKVSF 180

Query: 181 EPVQLKENLDALLGALIKAKPAAAKGVFVKKVSISTTMGAGVAVDQSTLN 230
            P Q+++N    +  L K KP AAKG ++K + +S+TM AG+ +D  +++
Sbjct: 181 SPDQIRDNAKEFISTLNKLKPTAAKGTYIKSIYLSSTMSAGIKIDPKSVD 230