Pairwise Alignments

Query, 180 a.a., NusG antitermination factor (RefSeq) from Shewanella loihica PV-4

Subject, 185 a.a., Transcription antitermination protein NusG from Xanthomonas campestris pv. campestris strain 8004

 Score =  249 bits (637), Expect = 1e-71
 Identities = 121/183 (66%), Positives = 148/183 (80%), Gaps = 9/183 (4%)

Query: 6   KRWYVVQAFSGYEGRVCKSLLEHIKMHGMEHYFGEVLVPTEEVVEMRAGQRRKSERKFFP 65
           KRWYVV A+SG+E  V ++L + I    ME  FG+VLVPTEEV+EMRAGQ+R+SERKFFP
Sbjct: 2   KRWYVVHAYSGFEKSVAQALRDRIARTEMEERFGDVLVPTEEVIEMRAGQKRRSERKFFP 61

Query: 66  GYVLVQMEMNDE---------SWHLVKSIPRVMGFIGGTSDRPAPISDREADAILQRLQE 116
           GYVLVQ+E +DE         SWHLVK  P+VMGFIGGT+DRP PI D EADAILQR+Q+
Sbjct: 62  GYVLVQIETHDEAGIPRIDNESWHLVKETPKVMGFIGGTADRPLPIRDEEADAILQRVQD 121

Query: 117 TTESPTHRVMFEPGEVVRVTDGPFADFNGTVEEVDYEKNRVKVSVMIFGRSTPVELDFSQ 176
             E P  +V+FEPG++VRVTDGPF DFNG VEEV+YEK+R++V+V+IFGRSTPVEL+F Q
Sbjct: 122 GVEKPRPKVLFEPGQMVRVTDGPFNDFNGVVEEVNYEKSRLRVAVLIFGRSTPVELEFGQ 181

Query: 177 IEK 179
           +EK
Sbjct: 182 VEK 184