Pairwise Alignments

Query, 180 a.a., NusG antitermination factor (RefSeq) from Shewanella loihica PV-4

Subject, 183 a.a., transcription antitermination protein nusG (RefSeq) from Shewanella sp. ANA-3

 Score =  339 bits (869), Expect = 2e-98
 Identities = 163/177 (92%), Positives = 174/177 (98%)

Query: 3   EAKKRWYVVQAFSGYEGRVCKSLLEHIKMHGMEHYFGEVLVPTEEVVEMRAGQRRKSERK 62
           EAKKRWYVVQAFSGYEGRVCKSL+E+IKMHGME YFGEVLVPTEEV+EMRAGQRRKSERK
Sbjct: 6   EAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRRKSERK 65

Query: 63  FFPGYVLVQMEMNDESWHLVKSIPRVMGFIGGTSDRPAPISDREADAILQRLQETTESPT 122
           FFPGYVLVQMEMND+SWHLVKSIPRV+GFIGGTSDRPAPISDREADAIL+RLQETT SPT
Sbjct: 66  FFPGYVLVQMEMNDDSWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQETTASPT 125

Query: 123 HRVMFEPGEVVRVTDGPFADFNGTVEEVDYEKNRVKVSVMIFGRSTPVELDFSQIEK 179
           HRV+FEPGEVVRV DGPFADFNGTVEEVDY+K+RVKVSVMIFGRSTPVELDF+Q+EK
Sbjct: 126 HRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFNQVEK 182