Pairwise Alignments

Query, 864 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella loihica PV-4

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  303 bits (775), Expect = 3e-86
 Identities = 162/314 (51%), Positives = 228/314 (72%), Gaps = 4/314 (1%)

Query: 534 VIGDVVNMFDGLAKGDLNRQIQGEYQGQFGKLQADANATAAKLTEVLDGINQSANTVTSG 593
           V+ +V  +   L+ GDL+ Q+   ++G+F +L    +     L +++  IN  A T+   
Sbjct: 302 VVNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLA 361

Query: 594 AEEIAQGNADLSQRTEEQAASLEETASSMEEMTATVTQSAQNATVANQLAQEANTKAAHG 653
           A EI+ GN DLS RTE+QA++LE+TASSMEE+ +TV Q++ NA  AN LA +A   AA G
Sbjct: 362 ATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASG 421

Query: 654 GKVVEQAVTAMEAINESSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVA 713
           G+++EQ V  M +INES+++IADIIGVID IAFQTN+LALNAAVEAARAGEQGRGF+VVA
Sbjct: 422 GELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVA 481

Query: 714 GEVRNLAQRSAGAAKEIKELIRDSVTKVTDGTQLVNQSGETLEDIVQAVTKVADMISQIS 773
            EVR+LAQRSA AAK+IK LI DSV+K+++G +LV++SG T++DIV ++ +V D+++ I+
Sbjct: 482 SEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIA 541

Query: 774 IASDQQSAGIQEVNKAISQMDEMTQQNAALVEQVSAAGDAMAEQARNMKSQLGFFQSQAP 833
            AS +Q+ GI EVN+A++QMDEMTQQNAALVE+ +AA +++  QA  +   +  F+    
Sbjct: 542 SASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFR---- 597

Query: 834 MHSGMTSAPLSLVA 847
           +    TSAP  L A
Sbjct: 598 LPDQDTSAPSLLKA 611