Pairwise Alignments

Query, 239 a.a., DNA polymerase III subunit epsilon (RefSeq) from Shewanella loihica PV-4

Subject, 228 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella sp. ANA-3

 Score =  127 bits (320), Expect = 1e-34
 Identities = 78/210 (37%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 16  KFEQRLKTTEHQGLRQYYLGGLPDPDTPLAEVELLAMDFETTGLNVDKDDIVSIGTVPFT 75
           K   R    +H+  + YY   +P  + P++   L+AMD E TGLN  +D I+SIG VP  
Sbjct: 9   KLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLIAMDLEMTGLNPLQDQILSIGLVPIE 68

Query: 76  LRRIFLNRAQHWTVRPREQLAEESVIIHGITHSDILDAPDLSAIFEQVLEQMAGKIMVVH 135
              I L  AQ   V+ +  + + S  IHGI  + + +A  +       + Q  G ++V H
Sbjct: 69  NGAIPLMGAQQKLVQIQGSVGQ-SATIHGILDNHLTEAVTIEEAMAWFVAQTRGHVLVAH 127

Query: 136 YQAIERLFLERALIRRIHQGIEFPLIDTMALESEIQKRQHGGLLQRLKGDKPGSVRLGQS 195
           +  ++  FL++ ++   HQ I  P IDT+ LE     R+H  L       K GS+RLG  
Sbjct: 128 HSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEKHRLLREHSVL-------KEGSLRLGAC 180

Query: 196 RSRYGLPSYPPHNALTDAIATAELLQAQIA 225
           R RYGLP Y  H+ALTDA+A  ELL AQ+A
Sbjct: 181 RERYGLPIYGAHSALTDALACGELLLAQVA 210