Pairwise Alignments

Query, 175 a.a., protoporphyrinogen oxidase (RefSeq) from Shewanella loihica PV-4

Subject, 174 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (393), Expect = 3e-43
 Identities = 75/172 (43%), Positives = 116/172 (67%), Gaps = 4/172 (2%)

Query: 3   RTLIIYSTVDGQTKAICDQIAEQCKSDTQPVTMVSLEEAQSVNLSYFDKVIIGASIRYGK 62
           + L++YS+ +GQT+ I ++IA+Q         +  L +   + L+ ++K++IGASIRYG+
Sbjct: 2   KALLLYSSQEGQTRKIIERIAQQMPE--YDCDIQDLHQVHEIALADYEKILIGASIRYGR 59

Query: 63  HRPELFQYVNRHRAVLNGKKNAFFTVNVVARKPE--KNTPETNPYMKKFLQLSLWQPQQL 120
              +L+Q++ RH   L   K AFF VN+ ARK +  K+TPE + Y++ FL+ S WQP+++
Sbjct: 60  LNEKLYQFIQRHVTTLTNSKAAFFCVNLTARKEDQGKDTPEGSVYIQTFLKKSPWQPERI 119

Query: 121 GVFAGKIDYPKYRFFDKFMIRFIMWITKGPTDTSGTYEFTDWDKVQEFAKAF 172
            VFAG + YP+YR+FDK MIR IM +T G TDTS   E+T+W+KV +F + F
Sbjct: 120 AVFAGALYYPRYRWFDKMMIRLIMTLTGGETDTSKEVEYTNWEKVSQFGEQF 171