Pairwise Alignments

Query, 366 a.a., DNA polymerase III, beta subunit (RefSeq) from Shewanella loihica PV-4

Subject, 366 a.a., DNA polymerase III subunit beta from Pantoea sp. MT58

 Score =  418 bits (1074), Expect = e-121
 Identities = 216/366 (59%), Positives = 275/366 (75%)

Query: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAELQ 60
           MKF ++R+ LLKPLQ VSG +  R  LPIL NLL++V+  SL LTGTDLE+E+V +  L 
Sbjct: 1   MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALT 60

Query: 61  GEVQEGRTTVPAKKFLDIVKSLPDQVELKIEQQDNRLLLRSGRSRFTLATLPAEEYPNVD 120
              + G TTVPA+KFLDI + LPD  E+ +  + +R+L+RSGRSRF+L+TLPA ++PN+D
Sbjct: 61  QAHEPGSTTVPARKFLDICRGLPDGAEITLALEGDRMLVRSGRSRFSLSTLPASDFPNLD 120

Query: 121 AFQADIEFTLKQGTLKSLIDATQFSMANQDVRYYLNGLLLETEGNVLRAIATDGHRLALS 180
            +Q+++EFTL Q TLK LI+ATQFSMA+QDVRYYLNG++ ETEG  LR +ATDGHRLA+ 
Sbjct: 121 DWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMMFETEGEELRTVATDGHRLAVC 180

Query: 181 HRMVQDSLPEKQVIVPRKGVLELQRLFEGEDLDVTLSIGENAIRATTQSAVFTSKLVDGR 240
              +  +LP   VIVPRKGV+EL RL +G D  + + IG + IRA     +FTSKLVDGR
Sbjct: 181 SMPIGQALPSHSVIVPRKGVIELLRLLDGGDTPLQVRIGGSNIRAHVGDYIFTSKLVDGR 240

Query: 241 FPDYRRVLPKGGDKIVIASRNHLKQALLRASILSNEKFRGVRVQLEQNLIKITANNPEQE 300
           FPDYRRVLPK  DK++ A  + LKQA  RA+ILSNEKFRGVR+ + +N +KITANNPEQE
Sbjct: 241 FPDYRRVLPKNPDKVLEAGCDLLKQAFARAAILSNEKFRGVRLYITENQLKITANNPEQE 300

Query: 301 EAEEILDIEYDNAPLEIGFNVSYLLDVLNNLPSDDVRITLIDGNSSALIENHVEEDSMYV 360
           EAEE+LD+ Y+   LEIGFNVSY+LDVLN L  ++VR+ L D  SS  IE+     + YV
Sbjct: 301 EAEEMLDVSYNGTELEIGFNVSYVLDVLNALKCENVRLLLTDSVSSVQIEDVASPAAAYV 360

Query: 361 VMPMRL 366
           VMPMRL
Sbjct: 361 VMPMRL 366