Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 482 a.a., chromosomal replication initiator protein DnaA from Pseudomonas stutzeri RCH2

 Score =  640 bits (1651), Expect = 0.0
 Identities = 327/482 (67%), Positives = 388/482 (80%), Gaps = 23/482 (4%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTIN 60
           M+V LWQQC+  L+DEL AQQF+ WIRPLQ E DGE L +YAPNRFVLDWV +KYL+ + 
Sbjct: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEGDGEELRVYAPNRFVLDWVNEKYLSRLL 60

Query: 61  QFFTEQMGSDAPKLRFDIGSRPASKPAAPAASTK---------SPVAPAAKSPSK---PS 108
           +  +E+    AP L   IGS+  S  A P+A+           S  APAA SP++    S
Sbjct: 61  ELLSERSSGLAPALSLLIGSKRTSSAALPSAAAARAQPQPTVVSTPAPAAPSPARFEPLS 120

Query: 109 FNSNEPAATA-----------NHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAY 157
            +++EP                H S +N T+ F+NFVEGKSNQL +AAA QV++NP   Y
Sbjct: 121 ADTSEPEQPRVERNVQVEGGLKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHGY 180

Query: 158 NPLFLYGGTGLGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRY 217
           NPLFLYGG GLGKTHL+HAVGN ++K NPNAKVVY+HSERFV DMVKALQ NAI EFKR+
Sbjct: 181 NPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRF 240

Query: 218 YRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSR 277
           YRSVDAL IDDIQFFA K+RSQEEFFHTFNALLEG  QVILTSDRYPKEIDG+E+RLKSR
Sbjct: 241 YRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIDGLEERLKSR 300

Query: 278 FGWGLTVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIA 337
           FGWGLTVA+EPPELETRVAILM+KA ++ ++LP + AFFIA+R+RSNVRELEGAL RVIA
Sbjct: 301 FGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALKRVIA 360

Query: 338 NANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVAR 397
           +A+F GR ITI+ +RE+L+DLLALQ+KLV++DNIQ+TVAEYYKIK++D+LSKRRSRSVAR
Sbjct: 361 HAHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVAR 420

Query: 398 PRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 457
           PRQ+AMALSKELTN SLPEIGDAFGGRDHTTVLHACRKIA+LRE   DI+EDY NL+RTL
Sbjct: 421 PRQVAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIAELRETDADIREDYKNLLRTL 480

Query: 458 SS 459
           ++
Sbjct: 481 TT 482