Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 509 a.a., chromosomal replication initiator protein, DnaA (NCBI) from Rhodospirillum rubrum S1H

 Score =  357 bits (915), Expect = e-103
 Identities = 197/484 (40%), Positives = 290/484 (59%), Gaps = 32/484 (6%)

Query: 6   WQQCIGRLQDELSAQQFSMWIRP--LQAEMDGETLVLYAPNRFVLDWVRDKYLNTINQFF 63
           W +  G L+ E     +  W+ P  L A ++GE   L  P RF+ DWV + Y + I   +
Sbjct: 28  WDRVRGFLKREFGDSAYRTWVVPMTLVAAVEGEVR-LAVPTRFMRDWVMNHYGDRIRSLW 86

Query: 64  TEQMGSDAPKLRFDIGSRPASKPAA--------------PAASTKSPVAPAAKSPSKPSF 109
             +  S    + F + S PA  P A              PAA  +   A A +  ++ S 
Sbjct: 87  AAE-DSSIRYVDFIVESAPAPAPPARAGQDADRAEGASDPAAGQRPAEAGAPRPAARASR 145

Query: 110 NSNEPAATANHR--------------SNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGG 155
                AA                   + ++P + FDNFV GK N+   AAA +V+++ G 
Sbjct: 146 TMVRVAAEGGAEGADSAPAPLDDGISAPLDPRFTFDNFVVGKPNEFAYAAAKRVADSTGV 205

Query: 156 AYNPLFLYGGTGLGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFK 215
           A+NPLFLYGG GLGKTHL+HA+  GI + +P+ +V+Y+ +E+F+   ++AL+      FK
Sbjct: 206 AFNPLFLYGGVGLGKTHLMHAIARGIREASPHRRVIYLSAEQFMHRFIRALRQQDTMSFK 265

Query: 216 RYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLK 275
             +RSV+ L +DDIQF + KD +QEEFFHTFNAL++   Q++L++D+ P +++ +  RL+
Sbjct: 266 EQFRSVEVLMVDDIQFISGKDSTQEEFFHTFNALVDQGSQIVLSADKSPTDLENIGARLR 325

Query: 276 SRFGWGLTVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRV 335
           SR   GL   + P   E R+ IL  KA+  G+++P++V  FIA ++ SN RE+EGAL R+
Sbjct: 326 SRMACGLVADLHPTTYELRLGILESKAEHMGVSVPEKVLEFIAHKIASNGREVEGALIRL 385

Query: 336 IANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSV 395
           IA+A   GR +T++  ++ L DLL   +K VT+D IQK VAE++KI++ADM S RR+R+V
Sbjct: 386 IAHAQLVGRDLTLETAQDVLHDLLRTYDKRVTVDEIQKKVAEHFKIRLADMHSARRARAV 445

Query: 396 ARPRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIR 455
           ARPRQ+AM L K+LT++SLPEIG +FGGRDHTTV+HA RK+ +L        ED   L R
Sbjct: 446 ARPRQVAMYLCKQLTSRSLPEIGKSFGGRDHTTVMHAVRKVEELILADGTFAEDVELLRR 505

Query: 456 TLSS 459
            L +
Sbjct: 506 MLEA 509