Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 491 a.a., chromosomal replication initiator protein DnaA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  220 bits (561), Expect = 7e-62
 Identities = 152/482 (31%), Positives = 231/482 (47%), Gaps = 32/482 (6%)

Query: 4   SLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTINQFF 63
           S+W Q    LQ+ L+   F +WI PL  E+DG TL + APN FV  WVRD+    I    
Sbjct: 3   SIWGQIQHILQNTLAPGLFKVWISPLAGEVDGSTLRVEAPNEFVAGWVRDRLFEDIRTAA 62

Query: 64  TEQMGSDAPKLRFDIGSRPASKPA---APAASTKSPVAPAAKSPSKPSFNSNEPAATANH 120
              +G D  ++    G+  A+ P    AP  +    V  AA  PS        P+  A  
Sbjct: 63  CGVIG-DTVEVVVTAGAPAAAAPRPVLAPRPAVVEVVPTAAPVPSVVPAVEARPSGHAPR 121

Query: 121 R-----------------------SNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAY 157
           R                       S  N  + FD+F+ G +N+L  AAA  +  + G   
Sbjct: 122 RLSAETQQAQEQLGLPLDWAPVPQSRTNWRFSFDDFIVGPNNELACAAARGMCRD-GLMT 180

Query: 158 NPLFLYGGTGLGKTHLLHAVGNGIIK--NNPNAKVVYMHSERFVQDMVKALQNNAIEEFK 215
           + LFL  G GLGKTHLLHAVG  + +  N  N  V Y+ +E F   ++ AL+   +E FK
Sbjct: 181 DTLFLSSGPGLGKTHLLHAVGRSLCESSNRSNPNVAYLTAEEFASRLIAALKARDVERFK 240

Query: 216 RYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLK 275
             YR VD L ++D+ F   K++ Q+E   T  AL     +++ +S    +++  V+++L 
Sbjct: 241 ARYRDVDVLLLEDVHFLQGKEKMQDEVLATVKALQSRGSRIVFSSSFAARDLKNVDNQLV 300

Query: 276 SRFGWGLTVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRV 335
           SRF  G    IE P+ +TR  IL  KA+   + LPD V   +A+R+ ++VR++E  L+ +
Sbjct: 301 SRFCSGFLAGIERPDFDTRRRILREKARIYQVMLPDNVTDLLAERISTDVRQIESCLHNL 360

Query: 336 IANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSV 395
           I  A    R I+++   E + +  A  E  +  + I + V E + +    + S+ R R  
Sbjct: 361 ILKAKLLNRQISLEMAFEIIGN-YAQAETQLDFEGIVRMVCEGFGLSPEQLNSRSRKREY 419

Query: 396 ARPRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIR 455
              R  A  L+++ T+ SL EIGD F  R H+TVL     + +       +    AN I 
Sbjct: 420 VVARNAAYLLARKHTDLSLKEIGDRF-NRRHSTVLKGITALEREMNRETPLGRQVANTIS 478

Query: 456 TL 457
            L
Sbjct: 479 LL 480