Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 460 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  360 bits (925), Expect = e-104
 Identities = 197/466 (42%), Positives = 283/466 (60%), Gaps = 13/466 (2%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQ-AEMDGETLVLYAPNRFVLDWVRDKYLNTI 59
           M    W      L   +    +  WI PL+ A+  G  +   AP+ FV +WV   Y   I
Sbjct: 1   MTEDTWGSVQNDLLKTVGQNNYLTWIEPLKFADCRGGVVRFEAPSSFVGNWVARNYREDI 60

Query: 60  NQFFTEQMGSDAPKLRFDIGSRPASKPAAPAASTKSPVAPAAKSPSKPSFNSNEPAATAN 119
                   G +  ++ FD+     +K A  A   +        +PS      ++P  +A+
Sbjct: 61  LHHLVSA-GVEVKRIEFDV-----AKLAQAARQVRPKGTERTMTPSPGDVAMDKPVPSAS 114

Query: 120 HRSN-MNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHAVG 178
            +S  ++P   F NFV GK N+L  A+A +V+E    ++NPLFLYGG GLGKTHL+HA+ 
Sbjct: 115 LQSAPLDPRLTFSNFVVGKPNELAHASARRVAEGGPVSFNPLFLYGGVGLGKTHLMHAIA 174

Query: 179 NGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRS 238
                 NP  KV+Y+ +E+F+   V+AL++    EFK  +RSVD L +DD+QF A KD +
Sbjct: 175 WEAQARNPGLKVLYLSAEQFMYRFVRALRDRNTMEFKELFRSVDLLMVDDVQFIAGKDST 234

Query: 239 QEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAIL 298
           Q+EFFHTFNAL++ N Q+I+++DR P EIDG+EDR+KSR   GL V I P + E R+ +L
Sbjct: 235 QDEFFHTFNALVDQNKQIIISADRAPGEIDGLEDRIKSRLSCGLVVDIHPTDYELRLGVL 294

Query: 299 MRKAQE-----SGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVRE 353
            ++ Q+       I + D V   +A+R+ +NVR LEGALNR+IA ++  GR IT+D   E
Sbjct: 295 QQRLQDQIAAGETIAVEDGVLECLAQRISTNVRVLEGALNRLIAFSDLVGRRITLDLAHE 354

Query: 354 ALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQS 413
           AL DL+   +K VT+D I + VA+YY ++M D+L  RR+R++ARPRQ+AM L+K LT +S
Sbjct: 355 ALSDLIRAHDKKVTVDEIMQAVAKYYNLRMTDLLGPRRTRTIARPRQLAMYLAKTLTTRS 414

Query: 414 LPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 459
           LPEIG  FGGRDHTTV+HA ++I  L +    I ED  +L+RTL +
Sbjct: 415 LPEIGRRFGGRDHTTVIHAVKRIEALCDSDPQISEDVRSLLRTLEN 460