Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 595 a.a., chromosomal replication initiator protein DnaA from Cupriavidus basilensis FW507-4G11

 Score =  427 bits (1098), Expect = e-124
 Identities = 206/341 (60%), Positives = 268/341 (78%)

Query: 117 TANHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHA 176
           + + RS +N    FDNFV GK+NQL +AAA+QV+ NPG +YNPL+LYGG GLGKTHL+HA
Sbjct: 253 SVHERSRLNHILTFDNFVTGKANQLARAAAIQVANNPGKSYNPLYLYGGVGLGKTHLIHA 312

Query: 177 VGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKD 236
           +GN ++  NP A++ Y+H+E++V D+VKA Q  A +EFKRYY S+D L IDDIQFF+ K+
Sbjct: 313 IGNFMLLENPRARIRYIHAEQYVSDVVKAYQRKAFDEFKRYYHSLDLLLIDDIQFFSGKN 372

Query: 237 RSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVA 296
           R+QEEFF+ F AL+    QVI+TSD YPKEI G++DRL SRF  GLTVAIEPPELE RVA
Sbjct: 373 RTQEEFFYAFEALIANRAQVIITSDTYPKEISGIDDRLISRFDSGLTVAIEPPELEMRVA 432

Query: 297 ILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALR 356
           ILM+KA    +++P+EVAFF+AK LRSNVRELEGAL +++A +NF G+ ITID  REAL+
Sbjct: 433 ILMKKAAAENVSVPEEVAFFVAKHLRSNVRELEGALRKILAFSNFHGKDITIDVTREALK 492

Query: 357 DLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPE 416
           DLL +Q + ++++NIQKT A++Y IK+ADM SK+R  ++ARPRQ+AM L+KELT +SLPE
Sbjct: 493 DLLTVQNRQISVENIQKTCADFYNIKVADMYSKKRPANIARPRQIAMYLAKELTQKSLPE 552

Query: 417 IGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 457
           IG+ FGGRDHTTVLHA RKIA  R +   +  +   L +TL
Sbjct: 553 IGELFGGRDHTTVLHAVRKIADERSKDAQLNHELHVLEQTL 593



 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 6   WQQCIGRLQDELSAQQFSMWIRPLQA---EMDGETLVLYAPNRFVLDWVRDKYLNTINQF 62
           WQ    +L+ EL+ QQF  WI+PL     +     L + APNRF LDWV+ ++   I   
Sbjct: 5   WQAAAAQLERELTPQQFKTWIKPLAPVGFDEQAHALRIAAPNRFKLDWVKSQFSGRITAL 64

Query: 63  FTEQMGSDAPKLRFDIGSRPASKPAA--PAASTKSPVAPAAKSPSKPSFNSNEPAATANH 120
             E   ++   + F +    + + AA  P  + +  +   A   + P + S +P +    
Sbjct: 65  ACEYWEANV-SVHFVLDPAASGRAAAGYPQQAGQPGLPGMAAQHAGPGYPSGQPLSQNFG 123

Query: 121 RSNMNPTYQFDNFVEGKSNQLG 142
           +  M P      +  G  NQ G
Sbjct: 124 QPGMQPGQGGQGY--GPMNQAG 143