Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 490 a.a., chromosome replication initiator protein DnaA from Caulobacter crescentus NA1000

 Score =  288 bits (737), Expect = 3e-82
 Identities = 178/472 (37%), Positives = 255/472 (54%), Gaps = 22/472 (4%)

Query: 2   AVSLWQQCIGRLQDELSAQQFSMWIRP--LQAEMDGETLVLYAPNRFVLDWVRDKYLNTI 59
           A ++W +    L+ EL    F  WI P  L+    G+ +VL        DW+R      I
Sbjct: 23  AANVWSKVCVALKRELGDAAFGSWIAPAMLREAATGD-VVLVTSTGIARDWIRRSAWRRI 81

Query: 60  NQFFTEQMGSDAPKLRFDIGSRPASKPAAPAASTKSPVAPAAK--------SPSKPSFNS 111
            + +      DA   R D+ SR   + AA A    +P A AA+        S   P+  +
Sbjct: 82  GELWAAH---DATGRRIDLKSRLEFEAAAGAYVEATPKAVAAEPIEIVLPVSTDAPTVVA 138

Query: 112 NEPAATANHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKT 171
             P+A +     +   + F+ FV G +N+   A A +++    G +NP+  +G  G GKT
Sbjct: 139 --PSAKSPRTQGLQERFTFETFVPGPANEFAHAVARRIANWADGHFNPVLFHGPYGFGKT 196

Query: 172 HLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQF 231
           HLL+A+    ++N P  +VVY+ +ERF+   V+A+ +     FK   R+ D L IDD+ F
Sbjct: 197 HLLNALAWEAMRNAPEKRVVYLTAERFLSTFVRAVMDRQTAAFKEELRAADLLIIDDVHF 256

Query: 232 FANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPEL 291
            A K  +QEE FHT  AL+    +V+ ++DR P  +  ++  L+S    GL   +EP + 
Sbjct: 257 IAGKQSTQEELFHTLTALVGEGGRVVFSADRPPSAMTEMDAHLRSHLSAGLVCGLEPADR 316

Query: 292 ETRVAILMRKAQESGI------NLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRP 345
             R+ IL RK Q  G       ++  EV  F+A R   +VRELEGALN + A A      
Sbjct: 317 NLRLGILERKIQTLGAAHGFEPSIRPEVMQFLADRFTDSVRELEGALNTLSARAGEGLSR 376

Query: 346 ITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMAL 405
           +T+D V+  LR  L   EK +TID+IQK  AE+Y +K AD+LS+RR+R+VARPRQ AM L
Sbjct: 377 MTLDEVQAILRPHLRSGEKRITIDDIQKATAEHYGMKQADLLSERRNRAVARPRQAAMWL 436

Query: 406 SKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 457
           +K+LT +SLP+IG  FGGRDHTTVLHA R+I  LR E   +  D   L R L
Sbjct: 437 AKQLTTRSLPDIGRRFGGRDHTTVLHAVRRIEALRAEDSALSHDLETLTRKL 488