Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 488 a.a., chromosomal replication initiator protein DnaA from Bifidobacterium breve UCC2003

 Score =  299 bits (765), Expect = 2e-85
 Identities = 172/464 (37%), Positives = 264/464 (56%), Gaps = 22/464 (4%)

Query: 2   AVSLWQQCIGRLQ--DELSAQQFSMWIRPLQAE-MDGETLVLYAPNRFVLDWVRDKYLNT 58
           A  +W   +  L+    L+A++   W+  +  E + G T+VL   N   L  ++     +
Sbjct: 12  AAHIWSNTLTLLKRNSTLTAREKG-WLEGIVPEGVFGSTIVLCVDNNDTLQAIQGNLNES 70

Query: 59  INQFFTEQMGSDAPKLRFDIGSRPASKPAAPAASTKSPV----------APAAKSPS-KP 107
           + Q      G +     F +  R   +P +P  +  SP           AP    P+ + 
Sbjct: 71  LLQALHTATGENMFPA-FKVVPRSEPQPVSPYPTNASPTLTDFGKEPYGAPEPVIPAVEQ 129

Query: 108 SFNSNEPAATANHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTG 167
            F+  +     +  +++N ++ FD+FV G SN+  +  AL V+E  G  +NPL +YGG+G
Sbjct: 130 QFSVPQQKMNRDPETHLNKSFTFDSFVPGDSNRFARTVALAVAEGSGQDFNPLCIYGGSG 189

Query: 168 LGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNN-----AIEEFKRYYRSVD 222
           LGKTHLL+A+GN  +  +P  KV Y+ SE F  D + ALQN       I EF R YR VD
Sbjct: 190 LGKTHLLNAIGNYALVKDPGLKVRYVTSEEFTNDFIDALQNTNQSQGQIAEFNRRYRQVD 249

Query: 223 ALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGL 282
            L IDDIQF   K+ + ++FFHTFN+L + N ++++ SD  PK + G E RL SRF  GL
Sbjct: 250 VLLIDDIQFLGGKEATLDQFFHTFNSLHQANKRIVIASDVAPKNLKGFEARLISRFESGL 309

Query: 283 TVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFT 342
           TV ++PP+LETR+AIL   A  +G  +P++V   IA+R   N+RELEGAL RV A A+ +
Sbjct: 310 TVDVKPPDLETRIAILRMIAAMNGSKIPNDVLDLIAERFTENIRELEGALTRVTAVASLS 369

Query: 343 GRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMA 402
            +P+T     + L+D      ++   D I + VA+Y+ +   D++   R+++V  PRQ+A
Sbjct: 370 NQPVTRALAEQTLQDFFTTDVEIKPTDIIGQ-VAKYFHLTFEDIVGSSRTKNVVIPRQIA 428

Query: 403 MALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDI 446
           M L++E+T+ SL +IG+ FGGRDHTTV+HAC +I    ++  +I
Sbjct: 429 MYLAREMTSMSLMDIGEVFGGRDHTTVMHACTRIGDKMQQKQEI 472