Pairwise Alignments

Query, 185 a.a., DNA-directed RNA polymerase specialized sigma subunit, sigma24 from Dechlorosoma suillum PS

Subject, 190 a.a., RNA polymerase sigma-E factor from Pseudomonas fluorescens FW300-N2E2

 Score = 41.2 bits (95), Expect = 1e-08
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 14/117 (11%)

Query: 58  LFQRILQNAIRDYYRRSKVRSMWTTLLSSLTPGDDEDSDPLDTLEVEGKAGDSPEGSLEQ 117
           LFQ I +N + D++R+  V +        L    DE       L V+     SPE  L  
Sbjct: 78  LFQ-IARNRLIDHWRKQGVHN-------PLHDSYDEQ------LHVQPDDTTSPEQQLSL 123

Query: 118 SQVLAVIEAEISRLPGRQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTL 174
           S+  A ++A +  LP  QRE FL+R   D+++ + AA  G    +VK+    A   L
Sbjct: 124 SRDQARLDAALQALPEDQREVFLLRLHGDLELPQIAALTGAPLETVKSRLRYAQQKL 180