Pairwise Alignments

Query, 326 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

Subject, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 39  YQVTGCTDPLQALAKARKQSFDAVISDYRMPDMDGLEFLKELTLLQPECARLVLSGQTDM 98
           + V    D   ALA   +QSF AV+SD R+PD DGL  L  L  +Q     ++++G  D+
Sbjct: 28  FDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSLLVALKNVQSLMPVILITGHGDV 87

Query: 99  ATLIRMVNETHIYRFIPKPWHDYYLKSSLAQAIGYHQ 135
              ++ +++   + FI KP+    L +++AQA+  +Q
Sbjct: 88  DMAVKALHQ-GAFDFIEKPFQPERLANTVAQAVSQYQ 123



 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 5/127 (3%)

Query: 199 VAHATTPVLQEGKISVQVTPSARHALELVKNNTFSCIIADRKMPEMDGVELLQRFADLQP 258
           V  AT   LQ     V +      AL  ++  +F+ +++D ++P+ DG+ LL    ++Q 
Sbjct: 15  VRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSLLVALKNVQS 74

Query: 259 DCFRILISNEICEGDLIQAIGGAN--IFAFIQKPWSDFELKNSIAQALAQRRMLLENRQL 316
               ILI+     GD+  A+   +   F FI+KP+    L N++AQA++Q +  L ++  
Sbjct: 75  LMPVILITG---HGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNALSSQSR 131

Query: 317 AEIVQQA 323
           A  +  A
Sbjct: 132 AHYLASA 138