Pairwise Alignments

Query, 326 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

Subject, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 5/120 (4%)

Query: 10  RHILVVDDEPNIVSAVQRELASPPHGRYRYQVTGCTDPLQALAKARKQSFDAVISDYRMP 69
           R IL+VDDEP +++A++REL   P+  + +  T   + L+ L   ++     VISDYRMP
Sbjct: 5   REILLVDDEPAVLNALKRELR--PYFPHLHTATCAQEALELL---KQHPVQMVISDYRMP 59

Query: 70  DMDGLEFLKELTLLQPECARLVLSGQTDMATLIRMVNETHIYRFIPKPWHDYYLKSSLAQ 129
            M+G + + E+    P    L+LSGQ DM  L R +NE  +Y+F+ KPW   YL  ++ Q
Sbjct: 60  GMNGADLVIEINRRYPHIMSLILSGQADMNGLSRALNEGDLYKFLLKPWERNYLLQTILQ 119



 Score = 54.3 bits (129), Expect = 7e-12
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 164 QILIVDHDPGVLGSLSRVLTHHSEVDDLYLAIRAEVAHATTPVLQEGKISVQVTPSARHA 223
           +IL+VD +P VL +L R L             R    H  T               A+ A
Sbjct: 6   EILLVDDEPAVLNALKREL-------------RPYFPHLHTATC------------AQEA 40

Query: 224 LELVKNNTFSCIIADRKMPEMDGVELLQRFADLQPDCFRILISNEICEGDLIQAIGGANI 283
           LEL+K +    +I+D +MP M+G +L+       P    +++S +     L +A+   ++
Sbjct: 41  LELLKQHPVQMVISDYRMPGMNGADLVIEINRRYPHIMSLILSGQADMNGLSRALNEGDL 100

Query: 284 FAFIQKPWSDFELKNSIAQALAQR 307
           + F+ KPW    L  +I Q  +++
Sbjct: 101 YKFLLKPWERNYLLQTILQCFSEK 124