Pairwise Alignments

Query, 335 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

Subject, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 8/158 (5%)

Query: 10  RHILVVDDELSILHAVERELKGRRLGRYAFTVAGFTDPRQALVAAERQTFDAVISDFRMP 69
           R  L+ DD+      + R+  G+ L    F VA F D   AL A E+Q+F AV+SD R+P
Sbjct: 5   RIALIEDDD------IVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLP 58

Query: 70  GMDGLEFLKALAAIQPDCPRLVLSGQTDMDSLVRMVNETHIYRFIAKPWPAYMLQAALAQ 129
             DGL  L AL  +Q   P ++++G  D+D  V+ +++   + FI KP+    L   +AQ
Sbjct: 59  DTDGLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQ-GAFDFIEKPFQPERLANTVAQ 117

Query: 130 AI-DYAETLAENRRLAEAARQRQLSELLPEPAAVEQLL 166
           A+  Y   L+   R    A  + L ++L       QLL
Sbjct: 118 AVSQYQNALSSQSRAHYLASAKGLEQILIGQCKSIQLL 155



 Score = 48.1 bits (113), Expect = 4e-10
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 222 AYALQMAERVAFSCIIADYRMPEMNGIELLQRFAARQPDCSRILISGQIGEAELAQAIQQ 281
           A AL   E+ +F+ +++D R+P+ +G+ LL      Q     ILI+G  G+ ++A     
Sbjct: 37  ASALAAIEQQSFAAVVSDVRLPDTDGLSLLVALKNVQSLMPVILITGH-GDVDMAVKALH 95

Query: 282 AHIFAFVEKPWSDFELKANIALALAQHRLQLENRWLAAFM 321
              F F+EKP+    L   +A A++Q++  L ++  A ++
Sbjct: 96  QGAFDFIEKPFQPERLANTVAQAVSQYQNALSSQSRAHYL 135