Pairwise Alignments

Query, 335 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

Subject, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 81.3 bits (199), Expect = 5e-20
 Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 6/119 (5%)

Query: 10  RHILVVDDELSILHAVERELKGRRLGRYAFTVAGFTDPRQALVAAERQTFDAVISDFRMP 69
           R IL+VDDE ++L+A++REL+      +  T A     ++AL   ++     VISD+RMP
Sbjct: 5   REILLVDDEPAVLNALKRELRPYFPHLHTATCA-----QEALELLKQHPVQMVISDYRMP 59

Query: 70  GMDGLEFLKALAAIQPDCPRLVLSGQTDMDSLVRMVNETHIYRFIAKPWPA-YMLQAAL 127
           GM+G + +  +    P    L+LSGQ DM+ L R +NE  +Y+F+ KPW   Y+LQ  L
Sbjct: 60  GMNGADLVIEINRRYPHIMSLILSGQADMNGLSRALNEGDLYKFLLKPWERNYLLQTIL 118



 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 26/129 (20%)

Query: 164 QLLIVDDDMGVLNSLARVLTHHSKSDGLFAAILAEQHGQPRRRTLAEDHISVQITPSPAY 223
           ++L+VDD+  VLN+L R L  +     L  A  A++                        
Sbjct: 6   EILLVDDEPAVLNALKRELRPYFPH--LHTATCAQE------------------------ 39

Query: 224 ALQMAERVAFSCIIADYRMPEMNGIELLQRFAARQPDCSRILISGQIGEAELAQAIQQAH 283
           AL++ ++     +I+DYRMP MNG +L+     R P    +++SGQ     L++A+ +  
Sbjct: 40  ALELLKQHPVQMVISDYRMPGMNGADLVIEINRRYPHIMSLILSGQADMNGLSRALNEGD 99

Query: 284 IFAFVEKPW 292
           ++ F+ KPW
Sbjct: 100 LYKFLLKPW 108