Pairwise Alignments

Query, 461 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

Subject, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  385 bits (988), Expect = e-111
 Identities = 214/463 (46%), Positives = 287/463 (61%), Gaps = 30/463 (6%)

Query: 23  TVLVVDDEEGMRSFLTRTLALRGWQVEAAASAEEGAAQLAGRHFDLIILDIALPGKSGLE 82
           +VL+VDDE GM+  L + L+    +V+ A+S EE        H+DL+ILDI LPG+SG+E
Sbjct: 17  SVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIE 76

Query: 83  WLKDLKAAGFAGDVILITAFADMETAIDALRAGASDFVLKPFRVDQIVNSINRCFERARL 142
           W +         DVI +T FAD+ETAI AL+ GASDF+LKPF ++Q++ ++ RC  +   
Sbjct: 77  WEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLN 136

Query: 143 ARENFVLRRQLEERGGARDEIVGHSDSIARLRALVRRVAPTPSTVLIQGESGVGKELVAR 202
            R  + L+R  +       +I+G S     L+  + + AP+ ++VLI+GESG GKELVAR
Sbjct: 137 ERLQYALQRDFQRH--CTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVAR 194

Query: 203 ALHQLSPRASRPFVAVNCAAISADLIESELFGHVKGAFTGAKEARNGLFYYAHGGTLFLD 262
            +H+ S R   PFV +NC AI+ +L+ESELFGH  GAFTGAK++R GLF  A+GGTLFLD
Sbjct: 195 GIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLD 253

Query: 263 EIGEFPLALQSKLLRVLEERRIRPVGTEHEVPVDVRVVAATNRDLKQEAAQCRFRQDLFY 322
           EIGE PL +Q+ LLRVLE+R +RPVG+E EV VDVRVVAATNR+L+QE    RFR DL+Y
Sbjct: 254 EIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYY 313

Query: 323 RLEVMTLTVPPLRQRAEDVPELAALFMDNLCVQLGVAPLLITPEVAHALSAYTWPGNVRE 382
           RL V+ + V PLR+R +D+ EL   F   LC +LG+       E   ++  Y WPGN+RE
Sbjct: 314 RLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRE 373

Query: 383 LRNFVERSLLFGEFPLD--------------------------SLGSDGAAMEPAAAPPS 416
           L+N +ER LL G+ P                            SLG D         P  
Sbjct: 374 LKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLG-DNVTQPSLGYPND 432

Query: 417 LLLAEVEKRHILAVLAQSNGSKARAADLLGVSRKTLDRKCAEW 459
             L+ VEK HI  ++A   G+K+ AA  LGV+RKTL+RK  EW
Sbjct: 433 WPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEW 475