Pairwise Alignments

Query, 709 a.a., histidine kinase,HAMP domain-containing protein,histidine kinase from Dechlorosoma suillum PS

Subject, 853 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  128 bits (321), Expect = 1e-33
 Identities = 96/301 (31%), Positives = 156/301 (51%), Gaps = 33/301 (10%)

Query: 399 ELGRLSRAFDHLLDSLSARRLELQRSADELDRKVAERTAALEEANATLRRAQQQLVMNEK 458
           E  R  +A   L ++L +R  E  ++  E+  ++ +  A+ E+A   LR+AQ       K
Sbjct: 425 ERWRAEQALRELNETLESRIQERTQALAEVYERLLKEMASREQAQEALRQAQ-------K 477

Query: 459 LTAIGELTAGVAHEINNPVAVIQGNLELLRDVL--GEQAEPVRGEIRLIDEQTQRIRAIV 516
           + A+G+LT G+AH+ NN +  I G L+L++  +  G   E  R  I        R  A+ 
Sbjct: 478 MEAVGQLTGGIAHDFNNMLTGIIGGLDLIQRYIQSGRHGETQR-FIDAAVTSANRAAALT 536

Query: 517 TRLLQFARPGDFAGYAEATDVNGVVADCLVLTRHNLNK----AGVKVETRL-EACCNVEM 571
            RLL FAR        +  ++  V  + L+ + H+L        + ++ RL +    V  
Sbjct: 537 HRLLAFAR-------RQPLNLKRVELNQLIESMHDLLSRTLGRHIHIDNRLQQGLWPVSS 589

Query: 572 NRGELQQVLINLMMNAMQAMPQGGTLSMESRDI------GPGDAIPGEASFPGALLRVRD 625
           +  +L+  L+NL++NA  AMP GG+L +E+R++        GD   G       +LR+ D
Sbjct: 590 DENQLESALLNLVINARDAMPDGGSLLLETRNVELYSQGEVGDLAAGRY----VILRLTD 645

Query: 626 TGHGIAPADLDRIFDPFFTTKK-QEGTGLGLSISYAIIQRYGGRISVESAPGEHTTFTLW 684
           +G G++   L  +F+PFFTTK   +GTGLGLS+ Y   ++ GG I + S PGE T  +L+
Sbjct: 646 SGCGMSAKVLASVFEPFFTTKPIGQGTGLGLSMVYGFTRQAGGHIQIASEPGEGTQVSLY 705

Query: 685 L 685
           L
Sbjct: 706 L 706