Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  161 bits (407), Expect = 3e-44
 Identities = 96/218 (44%), Positives = 132/218 (60%), Gaps = 14/218 (6%)

Query: 6   PPPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAVFADA---MIAHRLD 62
           P     + ++Y+D A+VVVNKPA  LSVPG      D +++R++A F  A      HRLD
Sbjct: 350 PAQGQDITIVYQDDAIVVVNKPAEFLSVPG--VHVHDSVLTRLKAQFTQAEGVFALHRLD 407

Query: 63  MDTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRPR 122
           M TSGLLV A      K+L + F  R V KRY A++ G L + +GE+ LPL  D  +RPR
Sbjct: 408 MSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPR 467

Query: 123 QKVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMA---AIGHPILGDEL 179
           QKV +Q+GKP+LT +  + V+   + +RV L P TGRTHQLRVH A    +  PI+GD+L
Sbjct: 468 QKVCWQQGKPALTHWETVQVE--QNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDL 525

Query: 180 YAGPAQARAERLLLHASRLEFRHPITDEALSFESPPPF 217
           Y      + +RL LHA +L F HP T + ++F+    F
Sbjct: 526 YG----LQDKRLFLHAEQLSFAHPYTKQPMTFQVDADF 559