Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  198 bits (504), Expect = 6e-56
 Identities = 102/204 (50%), Positives = 137/204 (67%), Gaps = 3/204 (1%)

Query: 1   MISYQPPPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAVFADAMIAHR 60
           M  Y PP D  +D++YED  ++  NKP+GLLSVPGR  +  D + +R+     D  + HR
Sbjct: 3   MTEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHR 62

Query: 61  LDMDTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNR 120
           LDM TSGL++ A+G  M+  L + F+ R   K Y A V GV++  EGEV+LPL  DWPNR
Sbjct: 63  LDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNR 122

Query: 121 PRQKVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELY 180
           P+QKV F+EG+ SLTR++   V     ++ V L P+TGR+HQLRVHM ++GHPI+GD+LY
Sbjct: 123 PKQKVCFEEGRDSLTRYQ--VVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLY 180

Query: 181 AGP-AQARAERLLLHASRLEFRHP 203
           A P A   A+RL LHA+ L F HP
Sbjct: 181 APPEAVEFADRLQLHAAELCFYHP 204