Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (302), Expect = 2e-32
 Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 22/226 (9%)

Query: 9   DTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQ-----AVFADAMIAHRLDM 63
           D  L+++YED  ++V+NKP   +  PG G+     L + +      A    A I HRLD 
Sbjct: 81  DLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYSPIAEVPRAGIVHRLDK 140

Query: 64  DTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRPRQ 123
           DT+GL+V+A+    Q +L    ++R V++ Y+A+V G +    G +D P+      R   
Sbjct: 141 DTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT-AGGMIDKPIGRHSTKRTLM 199

Query: 124 KVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELYAGP 183
            V    GK ++T +R    +   + +R+ L   TGRTHQ+RVHMA + HP+LGD  Y G 
Sbjct: 200 SVS-PMGKHAVTHYR--VAEHFREHTRLRLRLETGRTHQIRVHMAYLQHPLLGDTAYGGR 256

Query: 184 AQARA-------------ERLLLHASRLEFRHPITDEALSFESPPP 216
           A+                +R  LHA  L+F HP+T E L F +P P
Sbjct: 257 ARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVP 302