Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 578 a.a., pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score =  162 bits (410), Expect = 1e-44
 Identities = 100/218 (45%), Positives = 128/218 (58%), Gaps = 14/218 (6%)

Query: 6   PPPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAVFADA---MIAHRLD 62
           P     L ++Y+D A+ VVNKPA  LSVPG+     D + SR++  F  A   +I HRLD
Sbjct: 369 PAEGKDLSIIYQDEAIAVVNKPAEFLSVPGK--HVTDSVYSRMRQAFPKATGPLIVHRLD 426

Query: 63  MDTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRPR 122
           M TSGL+V+A        L + F  R V KRY A VAG +Q +EGE+ LPL VD  +RPR
Sbjct: 427 MSTSGLMVIALSSEANTALVQQFIGRTVEKRYLARVAGEVQGEEGEITLPLRVDLDDRPR 486

Query: 123 QKVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMA---AIGHPILGDEL 179
           Q V F+ GK + T +  L       ++ + L P TGRTHQLRVH A    +G PI+GD+L
Sbjct: 487 QLVCFEHGKHAHTYW--LVKSRGEGTTLLSLFPKTGRTHQLRVHCAHQDGLGMPIIGDDL 544

Query: 180 YAGPAQARAERLLLHASRLEFRHPITDEALSFESPPPF 217
           Y     A+A RL LHA  L F HPI+ E +SF   P F
Sbjct: 545 YG----AKANRLHLHAQYLAFNHPISGERVSFSCDPDF 578