Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 225 a.a., pseudouridylate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  207 bits (528), Expect = 1e-58
 Identities = 110/215 (51%), Positives = 144/215 (66%), Gaps = 3/215 (1%)

Query: 4   YQPPPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAVFADAMIAHRLDM 63
           Y PP +  L++L+ED  ++VVNKP+GLLSVPGR     D + +RV     +A I HRLDM
Sbjct: 6   YAPPTEPWLEILHEDKDILVVNKPSGLLSVPGRDPAYYDSVYTRVLRDHPNAQIVHRLDM 65

Query: 64  DTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRPRQ 123
            TSG++V+A   + +++L   FR+R+  K Y A VAG L+ ++G VD PLI DWPNRP+Q
Sbjct: 66  ATSGIIVVALRRSAERELKRQFRDRETHKIYYARVAGHLKAEQGSVDYPLICDWPNRPKQ 125

Query: 124 KVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELYAGP 183
           KVD Q GK S T F    +  A  S+ V+L P+TGR+HQLRVHM AIGHPILGD  YA P
Sbjct: 126 KVDHQIGKASKTLFE--VISRAKRSTLVKLTPITGRSHQLRVHMMAIGHPILGDNFYADP 183

Query: 184 -AQARAERLLLHASRLEFRHPITDEALSFESPPPF 217
            A+  A RLLLHA  L   HP + + ++F +P PF
Sbjct: 184 LAKRLAPRLLLHAQSLSLTHPYSKQPMTFSTPIPF 218