Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 298 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis JJ

 Score =  108 bits (269), Expect = 1e-28
 Identities = 76/217 (35%), Positives = 121/217 (55%), Gaps = 14/217 (6%)

Query: 7   PPDTGLDLLYEDGALVVVNKPAGLLSVPGRG---EDKADCLVSRVQAVFADAMI--AHRL 61
           P +  L+++YED  L++V+KP  ++  P +    +  A+ + +  +    +  I   +RL
Sbjct: 77  PENLALNIIYEDDDLLIVDKPKNMVVHPTKNVLSKTLANAVSNHQKINNQNYKIRFVNRL 136

Query: 62  DMDTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEG--EVDLPLIVDWPN 119
           DMDT+GLL++A+ P   ++L +   E  + K Y AVV G L  KEG  E  + L  D   
Sbjct: 137 DMDTTGLLIIAKDPYSHQRLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNDDGIK 196

Query: 120 RPRQKVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDEL 179
           R    V    GK S T+++   ++   ++S +E++ +TGRTHQ+RVH+++ G+ I+GD L
Sbjct: 197 RELSNV----GKISKTKYK--VIEELKNASILEIKLLTGRTHQIRVHLSSTGNYIIGDTL 250

Query: 180 YAGPAQARAERLLLHASRLEFRHPITDEALSFESPPP 216
           Y G      ER  LH+  L F HPIT E + F S  P
Sbjct: 251 Y-GEISNLIERQALHSYILRFIHPITKEKMEFSSKLP 286