Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 541 a.a., ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  122 bits (305), Expect = 2e-32
 Identities = 88/225 (39%), Positives = 121/225 (53%), Gaps = 19/225 (8%)

Query: 7   PPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAVFADAM---------I 57
           P +  L +++ D  L+V++KPAGL   P     +   LV R+   F DA+         I
Sbjct: 88  PEEGDLTIIHRDEHLLVIDKPAGLTVHPCPSCPEGT-LVHRLVHHF-DALRAQEGFRPGI 145

Query: 58  AHRLDMDTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDW 117
            HR+D DTSGLL++A    ++ KL E F ER V K Y A+V GV     GEVD P+    
Sbjct: 146 VHRIDKDTSGLLLVALSEGVRLKLSEAFAERTVEKEYLALVHGV-PPATGEVDAPIGRHP 204

Query: 118 PNRPRQKVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGD 177
            ++ R  V  + GKP+ + +R L        + V +   +GRTHQ+RVHMA  G P+ GD
Sbjct: 205 THKVRMAV-VKGGKPARSEWRVLHAAPEGHYALVAVRIHSGRTHQIRVHMAHAGFPLWGD 263

Query: 178 ELY--AGPAQARAE----RLLLHASRLEFRHPITDEALSFESPPP 216
           +LY    PA+ R +    R +LHA  L F HP+T E L F  PPP
Sbjct: 264 QLYGPGTPARLREQGYGARQMLHAWHLAFTHPVTGERLRFTCPPP 308