Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 323 a.a., ribosomal large subunit pseudouridine synthase D (RefSeq) from Shewanella sp. ANA-3

 Score =  122 bits (307), Expect = 6e-33
 Identities = 79/223 (35%), Positives = 120/223 (53%), Gaps = 22/223 (9%)

Query: 12  LDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAV-----FADAMIAHRLDMDTS 66
           LD++YED  ++V+NK AGL+  PG G      + + +           A I HRLD DT+
Sbjct: 84  LDIVYEDDDILVINKQAGLVVHPGAGNADGTLMNALLHHCPNIEHVPRAGIVHRLDKDTT 143

Query: 67  GLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRPRQKVD 126
           GL+V+A+    Q  L    + R++++ Y+A+V G +    G VD P I   P +      
Sbjct: 144 GLMVVAKTVEAQTHLVAALQAREITREYEAIVLGTMT-AGGTVDEP-IGRHPTKRTHMAV 201

Query: 127 FQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELYAG---P 183
              GKP++T +R    +   + +R+ L   +GRTHQ+RVHMA IGH ++GD +Y G   P
Sbjct: 202 HHSGKPAVTHYR--VAEKFRNHTRLRLRLESGRTHQIRVHMAYIGHVLVGDPVYGGRPKP 259

Query: 184 AQARA----------ERLLLHASRLEFRHPITDEALSFESPPP 216
            +A +          +R  LHA RLE  HP+T E +S+ +P P
Sbjct: 260 PKAASPEFFEILKNFKRQALHAVRLELAHPVTCEIMSWTAPIP 302