Pairwise Alignments

Query, 388 a.a., arabinose efflux permease family protein from Dechlorosoma suillum PS

Subject, 383 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  311 bits (798), Expect = 2e-89
 Identities = 179/390 (45%), Positives = 236/390 (60%), Gaps = 15/390 (3%)

Query: 1   MHPSLPYWRLSGYYFFHFAFVGVFQPYFGLYLQSLGLSSWEIGLILSQMALMRLCSPAVW 60
           M+  LPYWRLSG+YFF+FA +G   P+ GLY   LG S   IG +++   LMR  +P +W
Sbjct: 1   MNAPLPYWRLSGFYFFYFALLGSTAPFLGLYFDHLGFSPERIGELIAIPMLMRCLAPNLW 60

Query: 61  GWLADHLHVRIPLVRLAAGVSVVVFNLFFFAQTLVPLLGAMALLAFFWSAALPLMETVVF 120
           GWL D    R+ +VRL A  +++ F L FF ++   L   MAL AFFW A LP  E +  
Sbjct: 61  GWLGDATGRRLEIVRLGALCTLLSFGLIFFDKSFAWLAMVMALHAFFWHAVLPQFEVITL 120

Query: 121 DHLHAEPARYSRVRIWGSIGYIVTVLATGAL-----LDYLPPASVLWMSFALMGGILAFA 175
            HLH +  RYS+VR+WGSIG+I+ V+  G L     LD  P A  +     +M GI+  +
Sbjct: 121 AHLHEQAERYSQVRLWGSIGFILAVVGLGLLFQRLSLDLYPTAVAV-----VMVGIVLSS 175

Query: 176 LLVPESPTPPQHVATPPVSTILAQ---PRVRALLGACFLMSAAHGALYLFYSIYLADHGY 232
             VP +  P Q          LAQ   P V A      LM  AHG  Y F+SI+L   GY
Sbjct: 176 FWVPNA-HPRQRADVAGQGGFLAQLRRPGVLAFYACVALMQLAHGPYYTFFSIHLEALGY 234

Query: 233 SKTLVGSLWFLGVIAEIGVFFFMARLLRRFSLRQVLLASFAAAVLRFLLIGWGVDSLPVL 292
           S++ +G +W LGV+AEI +F  MARLL RFSLRQVLLASF  A LR++L+G   D L VL
Sbjct: 235 SRSFIGLMWALGVVAEILLFLGMARLLERFSLRQVLLASFLIAALRWVLLGQFADHLAVL 294

Query: 293 LGAQLLHGLTFGAYHAAAIAAINRWFPGRCQARGQALYSSLSFGAGGLLGGLVSGWTWDG 352
           L AQL+H  TFG++HAAAI  + R F  R Q +GQALY+SLS G GG LG L +G+ W G
Sbjct: 295 LIAQLMHAATFGSFHAAAIHFVQRSFGHRQQGQGQALYASLS-GIGGALGALYAGYAWSG 353

Query: 353 LGNAATFGIGALFAVCGLVLVAGWVRDESA 382
           LG + +F I +L A+   V++A  +++  A
Sbjct: 354 LGPSWSFAIASLAALAAAVIIAFRLQENRA 383