Pairwise Alignments

Query, 388 a.a., arabinose efflux permease family protein from Dechlorosoma suillum PS

Subject, 389 a.a., major facilitator family protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  217 bits (552), Expect = 5e-61
 Identities = 126/379 (33%), Positives = 207/379 (54%), Gaps = 5/379 (1%)

Query: 10  LSGYYFFHFAFVGVFQPYFGLYLQSLGLSSWEIGLILSQMALMRLCSPAVWGWLADHLHV 69
           L   YFF F+ +G   PY G++ ++ G +  EIG +L+ +   R+ +P VW  +AD   +
Sbjct: 14  LCACYFFFFSILGTMIPYLGVFFENRGFNPQEIGFLLAILMATRIVAPNVWAKVADRTGM 73

Query: 70  RIPLVRLAAGVSVVVFNLFFFAQTLVPLLGAMALLAFFWSAALPLMETVVFDHLHAEPAR 129
           R  L+++ AG +++ +  FF+    V +  ++AL  FFW+A L  +E +  + L    +R
Sbjct: 74  RSELIKMGAGAAMLAYLSFFYHGGFVYMALSLALYTFFWNAILAQLEVITLETLGENASR 133

Query: 130 YSRVRIWGSIGYIVTVLATGALLDYLPPASVLWMSFALMGGILAFALLVPES-PTPPQHV 188
           Y ++R +GSIGYI  V+  G  +       + ++   L  G+L  AL +P +    PQ  
Sbjct: 134 YGQIRSFGSIGYICLVVGAGFAIGQWGTEVLPYIGLVLFTGMLVCALPLPANRAVRPQGQ 193

Query: 189 ATPPVSTILAQPRVRALLGACFLMSAAHGALYLFYSIYLADHGYSKTLVGSLWFLGVIAE 248
              P+     +P +  ++ A  L  +A G  Y F+ +YL   GY++   G    LG +AE
Sbjct: 194 ERQPLKW--TKPIIWFMISAMLLQMSA-GPFYGFFVLYLKQAGYTEAAAGIFVALGAMAE 250

Query: 249 IGVFFFMARLLRRFSLRQVLLASFAAAVLRFLLIGWGVDSLPVLLGAQLLHGLTFGAYHA 308
           I +F F  RLL R+ +  +L+ S A   +R+LL+ +GV+S+ +L  +Q+LH  TFG  HA
Sbjct: 251 IVMFMFAPRLLGRYGVNTLLVVSIAMTAVRWLLVAFGVESMLLLGLSQVLHAFTFGLTHA 310

Query: 309 AAIAAINRWFPGRCQARGQALYSSLSFGAGGLLGGLVSGWTW-DGLGNAATFGIGALFAV 367
           A+I  ++R F    +++GQALY+SLSFG GG LG  + G+ W DG G   ++   A  A 
Sbjct: 311 ASIQFVHRHFDASHRSQGQALYASLSFGVGGALGTWICGYIWGDGSGAVWSWVFAATCAF 370

Query: 368 CGLVLVAGWVRDESAPAAP 386
             ++ V    +D +   AP
Sbjct: 371 AAMLAVFFIPKDRAQAVAP 389