Pairwise Alignments

Query, 828 a.a., ribonuclease R from Dechlorosoma suillum PS

Subject, 751 a.a., ribonuclease R (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  348 bits (894), Expect = e-100
 Identities = 246/728 (33%), Positives = 366/728 (50%), Gaps = 33/728 (4%)

Query: 28  PSREYTMQLLQDQGRPVSFDQLVALLDISRDEEDLFQRRLNAMERDGQLLRNRKNSYILP 87
           P+++  +  ++D     +  ++     I        +R L  +E  G L   RK SY  P
Sbjct: 5   PTKDEVLAWIEDNPARANKREIARAFGIKGAARIDLKRLLKELEGKGHL-EKRKRSYRDP 63

Query: 88  EKADLIPGKVEGHPDGFG--FVKPDD-----GSDDLFLEPKQMDKVL-HGDRVLVRCIGL 139
           E    +     G  DG G  F +P D           + P++ D  L  GDR+L R   +
Sbjct: 64  ESLPPVSVLKVGDADGDGDLFARPLDWQGAGAEPACLIIPRKGDPALAEGDRILARLTRV 123

Query: 140 DRRGRR-EATIVEVLERANTRLVGRLMEEHGIQFVVAENKRISQDILIPPTAMTDKRAKL 198
           +      EA ++  +     +++G L +      +V  +K   ++  +    +      L
Sbjct: 124 EGEDYAYEARLIRRIGTGPRKILGILRKTAEGGRIVPIDKGADREWRVAQGGL------L 177

Query: 199 KARPGNVVMVEILEQPSRYSQPIGRIVEILGNYADPGMEIEIALRKHDLPFEFSKEAQAE 258
            A+ G++V  E      R   P+ R+ ++LG+         IA+ +H +  EF + A AE
Sbjct: 178 GAQDGDLVEAEQAGPKGRMGLPLARVTQVLGDPGGAKSVSLIAIHQHGILDEFPEAALAE 237

Query: 259 NKAVPDKVKKSDFKGREDLRELPLVTIDGETARDFDDAVFC-----EKVGRGWRLVVAIA 313
            +AV       +   R DLR+LPL+TID   ARD DDAV            G+ L VAIA
Sbjct: 238 AEAVT----APELGARTDLRDLPLITIDPPDARDRDDAVCAIPDDDPANPGGFVLWVAIA 293

Query: 314 DVSHYVRPGMALDQEAYDRGNSVYFPRRVIPMLPEKLSNGICSLNPDVERLAMVCDMNIS 373
           DV+  VRPG ALD+EA  RGNS YFP RV+PMLP+ LS  +CSL+ DV+R  M   M I 
Sbjct: 294 DVAAAVRPGGALDREARKRGNSTYFPDRVVPMLPDSLSGDLCSLHEDVDRACMAVRMVID 353

Query: 374 ATGSIGKYRFYPAVFRSHARLTYNQVWGWLSGQSQPENEVHQALQPHLQNLYKLFQVLLK 433
           A G+     F+  + RS A L Y +V   + G   P       L+P L+ L+  ++ L  
Sbjct: 354 AEGTKRGQTFHRGLMRSRASLAYGEVQAAVDGD--PTERTEPLLEPILRPLFAAYEALKA 411

Query: 434 ARKKRGAIDFETVETQMLFNAQGKIENIVPVVRNDAHRLIEECMLAANVCASGFLHEHKQ 493
           AR +R  +D +  E ++  +  G++ ++    R + HRLIEE M+ ANV A+  L + + 
Sbjct: 412 ARARRQPLDLDLPERRIALSETGEVTSVAFRDRLEVHRLIEEFMVLANVAAAETLAKKRT 471

Query: 494 ACLYRVHQGPTPEKLENLRAFLGEFGFSLAGGDEPKAKDYAELLEKIQGRPDTQLLQTVM 553
             LYRVH+ P   KL+ LR  +   G +LA G   +  D   LL +  G  D +L+    
Sbjct: 472 PLLYRVHEEPAETKLDALRETVQAAGLTLAKGRVLRTADLNRLLAQAAGTDDAELINIST 531

Query: 554 LRSLRQAQYAPENLGHFGLAYEAYTHFTSPIRRYPDLLVHRA-IKAVLAGE----TYNPG 608
           LRS+ QA Y+PEN GHFGLA + Y HFTSPIRRY DL+VHRA I A   GE      +  
Sbjct: 532 LRSMTQAYYSPENFGHFGLALQNYAHFTSPIRRYADLIVHRALITAHGFGEDGLSEADIE 591

Query: 609 KWEDIGLHCSGTERRADEATRDVDNWLKCFYMKERIGEEFEGTIAGVAAFGIFVALDEVF 668
           + ++ G   S  ERR+  A RD  +     Y+ +R+G EF   I+GVA FG F  LDE  
Sbjct: 592 RLDETGKLISEAERRSMAAERDTIDRYLAAYLADRVGNEFSARISGVARFGAFARLDETG 651

Query: 669 VEGMVHVSELGEDYFHFEPAKHQMLGERSGKRFRLGDRLRVKLVRADLESGRIDF-ILAQ 727
            +G++ +  +G ++FHF+     ++G  +G R  +G R+ V+L  A   +G I   +LA 
Sbjct: 652 ADGLIPIRTIGAEFFHFDADAQALVGSDTGFRLAMGQRVTVRLAEAVPVTGGIGLELLAV 711

Query: 728 EKKEGPAG 735
           E +  P G
Sbjct: 712 EDETVPTG 719