Pairwise Alignments

Query, 612 a.a., ATP-dependent DNA helicase RecQ from Dechlorosoma suillum PS

Subject, 715 a.a., DNA helicase RecQ from Pseudomonas sp. BP01

 Score =  662 bits (1708), Expect = 0.0
 Identities = 349/611 (57%), Positives = 435/611 (71%), Gaps = 20/611 (3%)

Query: 9   ALEILHRVFGYTAFRGSQGDIVGHVADGGDALVLMPTGGGKSLCYQIPALLRHGCGVVIS 68
           A  +L  +FGY +FRG Q  I+  VA+GGDALVLMPTGGGKSLC+Q+P LLR G  VV+S
Sbjct: 5   AQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVS 64

Query: 69  PLIALMQDQVDALTQLGVKAAYLNSTLDWQQVQEVERRVLCGDLDLLYVAPERLLTDRCL 128
           PLIALM DQV  L +LGV AA LNSTL  +Q +E+  R+  G++ +LY+APERL+  R L
Sbjct: 65  PLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRML 124

Query: 129 SLLDKLEEDKRLALFAIDEAHCVSQWGHDFRPEYLQLSALHNRYPDVPRIALTATADTAT 188
             L  L+    ++LFAIDEAHCVSQWGHDFRPEYLQL  L   +P VPRIALTATAD  T
Sbjct: 125 DFLRDLD----ISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT 180

Query: 189 REEMRVRLGLTEARVFVASFDRPNIRYLIVEKDNPRKQLLAFLANHKGEAGIVYCLSRKK 248
           REE+  RL L  A  F++SFDRPNI Y IV K+ PRKQL+AFL   +G AGIVYCLSRKK
Sbjct: 181 REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK 240

Query: 249 VEETAAWLTSQGIPALPYHAGLPAEVRADNQRTFLREEGITMVATIAFGMGIDKPDVRFV 308
           V+ETAA+L  QG PALPYHAGL AE R+ NQ  FL EEG+ MVATIAFGMGIDKP+VRFV
Sbjct: 241 VDETAAFLCDQGFPALPYHAGLAAETRSANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV 300

Query: 309 AHLDLPKSLEAYYQETGRAGRDGEPAEAWMAYGLQDVVLQRSRIEDSVAPEEQKRLEAQK 368
           AHLDLPKSLEAYYQETGRAGRDG P++AWMAYGLQD+V+ +  +++S   E  KR+E  K
Sbjct: 301 AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK 360

Query: 369 LNALLAYAESPRCRRVVLLDYFGEASE-PCNNCDVCLTPPELWDGTVAAQKALSVVYRTG 427
           L+A+LA  E  RCRR  LL YF E  E PC +CD C+   + WD T  A++ALS V+RTG
Sbjct: 361 LDAMLALCEETRCRRQSLLAYFDETLEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTG 420

Query: 428 QRFGVVHLIDVLRGKVSDKVKQWGHDALPTFGVGADLDDGAWRAVFRQLVAGGMLTADLA 487
           QR+GV HL+DVL GK ++KV+ +GH+ L  FGVG  L +  WR++FRQLVA G++  DL 
Sbjct: 421 QRYGVGHLVDVLLGKDNEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLE 480

Query: 488 EHGAMKLTDAARPVLRGEQTLQMRRHV-----ARKGGSGGGS-KSRSERAPTKLDDMTLE 541
            +G ++L+D+ RP+LRGE TLQ+RR +     A+   SGGGS  S+  RA         E
Sbjct: 481 GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKSSSSGGGSPASQLVRA---------E 531

Query: 542 DQSLFEDLRQWRAATAKEQGVPAYVILHDKTLKELAEERPTTRDQLMNISGMGTAKLERY 601
           ++ L+E LR  R   A+E  VP YVI  D TL E+   +P +   +  +SG+G  KLERY
Sbjct: 532 ERELWEALRTLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERY 591

Query: 602 GDDLLGIIRAA 612
           G   L ++ ++
Sbjct: 592 GQAFLEVLNSS 602