Pairwise Alignments

Query, 381 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 592 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  141 bits (355), Expect = 5e-38
 Identities = 117/394 (29%), Positives = 174/394 (44%), Gaps = 53/394 (13%)

Query: 34  ITLGMSAPFSGPNGIYGTEMRESITAYFEQINKGGGINGRKLELVSLDDGYETDRAVANT 93
           + LGMSAPFSGP    G E      +   ++N  GG++GR++E+V++DDGY+ DR V N 
Sbjct: 188 VRLGMSAPFSGPGVSLGREFHRGAASCLARVNAAGGVHGRRVEIVAMDDGYDPDRTVRNV 247

Query: 94  KKLIHDEKAFALLAFYGSSPTTAAMEVFSG---AKVPLVGTISGAETLRNPVNR-YMFNV 149
            +LI +E+ FAL    G+   T  + +  G     VPL+   +GA  L  P +   +F +
Sbjct: 248 IRLIEEERVFALFGLVGTPTVTRVLPLLGGHPERTVPLLFPFTGARPLSLPRHEGLVFRL 307

Query: 150 RASYANETDAIVSQLASLGLKNIAVFYQNDGFGKSGLDGVTAALKKHGLAPSAVGTVERN 209
           RASY  E   +V +L   G   IAVFYQ D +G+ G   +  AL +  L  +A  +  R 
Sbjct: 308 RASYDAEFSELVDRLHDAGCSRIAVFYQADAYGREGWADLRDALARRRLPLAAEASYPRG 367

Query: 210 S---LDVAKAVEAISKVTPQAVIMVTLYKPTAEFVRQM----------RKHGQ-NPQFM- 254
           S    D  +    I +  P AV+ V      A F+R +          R+ GQ +PQF  
Sbjct: 368 SGSDADFTEQAGLILQGMPDAVVCVGTDATCAAFIRDLRDVPAARGAKRQAGQPSPQFSG 427

Query: 255 ---TLSPVG----------ADLLVKELGNDAR-----GIGISQVMPYPWNDSNPLVREYR 296
                 PV            DLLV  +G   R      + +++V+  PW  + P   +YR
Sbjct: 428 KGGPAIPVAMPSFVDSRQLVDLLV-AMGRSVRRDYTHDLVLTEVVS-PWTGNLPAAIDYR 485

Query: 297 KLMTTM----------GKQSQSP----YYGVEGYAMAKVMVEGIKRAGKDLTRDKLTTAL 342
           +    M          G  +  P        EGY  A+++V  ++R G   +   L  AL
Sbjct: 486 RDFAEMADVPDVLDIPGNDAAPPSAPGEVSFEGYLAARLLVRALERMGPHPSPAGLHEAL 545

Query: 343 ESMGSYDLGGYRVSYSTSDHNGSRFVDLTVIGNG 376
             +  YDLG  +    T    G   V    +  G
Sbjct: 546 VGLDGYDLGVGQPYRYTPTEQGLGLVRFATVRGG 579