Pairwise Alignments

Query, 602 a.a., NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit from Dechlorosoma suillum PS

Subject, 565 a.a., Respiratory-chain NADH dehydrogenase domain 51 kDa subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  250 bits (639), Expect = 1e-70
 Identities = 187/561 (33%), Positives = 262/561 (46%), Gaps = 49/561 (8%)

Query: 10  AVLEAVLSKRRRDPTQLLQILREVQEQVGYIPPPALTAIAAALKLPRARVEGVAGFYSFL 69
           A L  VL  R R    L++ L  +Q++ G++    L A+A  ++L +A V  VA FY+  
Sbjct: 36  AELREVLGDRPRRRDLLIEFLHLIQDRYGHLSAAHLRALAEEMRLSQAEVYEVASFYAHF 95

Query: 70  HLQPVGKYRVLFSDNATDRLLGNL--DLLGTMCQKLWVEQGKVSEDGLVSVDVTSCTGMC 127
            +   G+         T R+  +L  +L G    K  +E G   + G V V    C G C
Sbjct: 96  DVVKEGESP---PPALTIRVCDSLSCELAGAQALKSALEDGL--DPGQVRVLRAPCMGRC 150

Query: 128 DQGPALLVNGRPITRLTHQRVNEICELIRSRRPLSLWPQ-EYFRVEDNIRRKDDLLNTVL 186
              P L +    I   T ++V +      +   +  +     +R E       DL     
Sbjct: 151 ATAPVLELGHNHIDHATPEKVQQAIAANHTHPTIPDYETLAAYRAEGGYGVLRDL----- 205

Query: 187 EPGAALAAAMALGP-EAWLGEVQKSSLRGRGGAGFTTGVKWEACRNAPGEERVIVCNADE 245
                     A G  E    +V++S LRG GGAGF +G KW   R  PG  R +  N DE
Sbjct: 206 ---------RASGDWEVVQAQVKQSGLRGLGGAGFPSGTKWGFVRANPGP-RYLAVNGDE 255

Query: 246 GEPGTFKDRVLLTSYPDHVFEGMTLAAYATGARQGFLYLRGEYRYLLEPLEAALQRRREA 305
           GEPGTFKDR  L   P    EGM +AA+A  A + ++Y+R EY  +LE L   +    EA
Sbjct: 256 GEPGTFKDRHYLERVPHLFLEGMLIAAWAVEAERCYIYMRDEYPAVLEILRREIAALEEA 315

Query: 306 GLLGQGIRGQASFDFDIEIHLGAGAYVCGEETALIESLEGKRGTPRIRPPFPVIKGYLGR 365
           G+   G          IE+  GAGAY+CGEE+A+IES+EGKRG PR RPP+    G  GR
Sbjct: 316 GIAEPG---------HIELRRGAGAYICGEESAMIESIEGKRGMPRHRPPYVAQVGLFGR 366

Query: 366 PTVVNNVETLAKTVLIALEGAERFAAVGTAQSTGTKLLSISGDCAFPGIYEYPFGVSIEQ 425
           PT+V+NVETL     I  EG E  +A       G +  S+SG  A PG+Y  P G +I  
Sbjct: 367 PTLVHNVETLHWIARICREGPEVLSATTHNDRVGLRSYSVSGRVARPGVYLLPAGSTILD 426

Query: 426 ILEDCGATD----VQAVQVGGASGTCLASYEFHRGIAYEDVPTAGSF------MIFDTSR 475
           I++  G        +A Q GG S   L +      + ++ +   G+F      ++     
Sbjct: 427 IIDAAGGMAEGHVFKAFQPGGPSSGLLPASAADVPLDFDTLQPLGTFIGSAAVVVLSDQD 486

Query: 476 DLFEVARNFVHFFAHESCGFCTPCRVGTSLLRNFMDKLATGHGAKYDLADIEWINRLLKA 535
              + A N + FF  ESCG CTPCRVG       M         ++D   +  +   +  
Sbjct: 487 RARDAALNMLRFFEDESCGQCTPCRVGCEKAVKLM------QAERWDAGLLSELCTAMAD 540

Query: 536 ASHCGLGLAAANPVVETLIKF 556
           AS CGLG AA NP++ T+  F
Sbjct: 541 ASICGLGQAAPNPILSTIKHF 561