Pairwise Alignments

Query, 868 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 730 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  145 bits (366), Expect = 8e-39
 Identities = 81/170 (47%), Positives = 104/170 (61%), Gaps = 2/170 (1%)

Query: 687 DRNRAMDSLHRLATVDTLTGLNNRSRFLDQGEAEITRARRLGRSVAVLMLDVDHFKRIND 746
           +   A + L +LAT D LTGL NR RFL+  E E+ R RR G  +A++ +DVD FKR+ND
Sbjct: 538 EHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVND 597

Query: 747 THGHGAGDVALKIVAAIIARELRAIDICGRLGGEEFAVMLPETDGQGAMQAAERLRQAVA 806
           T GH  GD  L+ +A I   E+R +D  GR+GGEEFAV+LP+T  + AM  AERLR  V 
Sbjct: 598 TWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVE 657

Query: 807 QEKVRVAEGVELGITVSIGATILAPQDANIDHLLARADGALYEAKRSGRN 856
              +    G  L +T+S+G +   P D   D LL  AD ALY AK  GRN
Sbjct: 658 AAPLLTTAG-PLTVTLSLGVSASPPCD-GADTLLREADRALYRAKAGGRN 705



 Score = 37.4 bits (85), Expect = 3e-06
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 422 VMVFVKDEDGRYLVMNEAAAAFVGHDKHEVVGRSDFE---LYPADVASRLRQDDIKALAA 478
           VM+ V  E G  +  N AA+ F G+    + G S  +   L P + A RL +     L  
Sbjct: 58  VMLLVDAETGCIIEGNPAASTFYGYPDGALCGMSINDIANLGPEEQARRLAE-----LRE 112

Query: 479 KKVTGREEKHLTPKGE-RYLLSYKRGVDLGGRRLLIGSSTDISERKQAEQLLAAERQVLE 537
            ++T    +H    GE R +  +   V L  R LL     DI++R +AE+ L    Q LE
Sbjct: 113 GRLTCFTSRHRLASGEVRDVEVHSVPVRLFERTLLYTIIHDITDRVRAEEALRRSEQHLE 172

Query: 538 LIASDASL 545
           ++   A +
Sbjct: 173 MVMDGAGI 180