Pairwise Alignments

Query, 868 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 981 a.a., diguanylate cyclase from Herbaspirillum seropedicae SmR1

 Score =  222 bits (565), Expect = 1e-61
 Identities = 181/621 (29%), Positives = 293/621 (47%), Gaps = 36/621 (5%)

Query: 247 ILDSVEQEYVAELRAALQEQSQRLQQSRHALLLASKVAESSQQAIMIVNAERIIQSINPA 306
           ILD+  Q  + ++ +   + S  +  SRH+  + S +  S    ++ ++ E +I + N  
Sbjct: 116 ILDA--QGQLLKVISVAADISAHIDDSRHSNSILSALNRSL--GVVELSPEGVILAANGN 171

Query: 307 FSAITGYSAEEAVGHDTRLLKSGLHDA-DFYRQLYADLAAFGVWSGEIWNRRKNGELYPE 365
           +     Y AE+ +G    +L    + A + Y   + D++    +SG    R ++G     
Sbjct: 172 YLKTMEYLAEDLLGQPHSILCEADYAASEEYTCFWRDVSLGRFFSGRFPRRTRSGRTIWW 231

Query: 366 NLTITSVKGEGGQVINYVCVFTDMTEQ-KRARDDLKESHQRLEQQSSLTEMILDTLPVMV 424
             T + +    G+    +C+ TD+T +  R + D +  H        L  + ++     V
Sbjct: 232 EATYSPLLDAHGKAERVICIGTDVTYRVTREKSDREHLH--------LLSLGINETDNAV 283

Query: 425 FVKDEDGRYLVMNEAAAAFVGHDKHEVVGRSDFELYPADVASRLRQDDIKALA---AKKV 481
            + D+  R +  N      +G +  +V+GR   EL+ +      R   +K+L     + V
Sbjct: 284 LITDDQNRIVFHNTGFTRMLGFESQQVIGRLPGELFAS------RPTFVKSLERCHGELV 337

Query: 482 TGR----EEKHLTPKGERYLLSYKRGVDLGGRRLLIGS---STDISERKQAEQLLAAERQ 534
            GR    EE     + +   +S      L G   LI +    TDI+  K  E L   + +
Sbjct: 338 QGRSYHTEELIHDMQEQPVWISAVVNPILDGAGKLIHAVCVMTDITNTKVHEVL---QYR 394

Query: 535 VLELIASDASLQVVLDALCNRVESLISDCFAAVLLLQPDNGHLVLGSAPSLRRTCRDVGQ 594
           VL  +A D+SL   ++ LC  VE +  +  A+VL +  ++G L   +APSL         
Sbjct: 395 VLNAMARDSSLSEQMNLLCEEVERVAPEVIASVLRVD-EHGCLRTLAAPSLPEAYSKAID 453

Query: 595 NCPENPAVCACAAAIRTGKQIIAEHIDDSEQWQDCRDFASALGLKTAWSTPIVSPGKEVL 654
                P V  C +A  TG+ +I+E I     W D +  A   GL+  WSTPI S   +V+
Sbjct: 454 GLHVGPMVGCCGSAAYTGQTVISEDIQTDPHWNDYKHLALPHGLRACWSTPIKSASGQVI 513

Query: 655 GTLSLYFRQGRRPNRFDKDVIEHACRQAAIAIDRNRAMDSLHRLATVDTLTGLNNRSRFL 714
           GT   Y+R   +P+ F   ++E      A+AI+R  A   +H+LA  D+LTGL NRS  L
Sbjct: 514 GTFGFYYRHPGQPSAFHHLLVEAGLHLCALAIEREDARARIHQLAFYDSLTGLPNRSLLL 573

Query: 715 DQGEAEITRARRLGRSVAVLMLDVDHFKRINDTHGHGAGDVALKIVAAIIARELRAIDIC 774
            Q    I  A R   +VAV+ +D+D FK++ND+ GH AGD  L+ VA  +  + R  DI 
Sbjct: 574 VQAGQAIAAAERNCSTVAVMFIDLDRFKQVNDSLGHQAGDELLRTVATRLQSQARRSDIV 633

Query: 775 GRLGGEEFAVMLPETDGQGAMQAAERLRQAVAQEKVRVAEGVELGITVSIGATILAPQDA 834
           GRL G+EF V+L + D Q   +  +R+++ +A        G  L  + SIG  I      
Sbjct: 634 GRLSGDEFVVVLTQYDTQHLTEVVKRIQERLAMP--CHINGTPLNPSASIGVAIFPDNGN 691

Query: 835 NIDHLLARADGALYEAKRSGR 855
           +I+ LL RAD A+Y+AK   R
Sbjct: 692 DIETLLHRADIAMYQAKAVNR 712



 Score = 37.0 bits (84), Expect = 6e-06
 Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 13/193 (6%)

Query: 268 QRLQQSRHALLLASKVAESSQQAIMIVNAERIIQSINPAFSAITGYSAEEAVGHDTRLLK 327
           QRL  S    LLA   A     AI+  +A+  +   N  F A+ GY   + VG   R+L 
Sbjct: 14  QRLSGSERDALLA---ALWRSMAILEFSADGTVLEANENFLAMLGYRRADVVGQHHRMLC 70

Query: 328 SGLH-DADFYRQLYADLAAFGVWSGEIWNRRKNGELYPENLTITSVKGEGGQVINYVCVF 386
              +   D Y+Q +  L    + +G +  R   G         + +    GQ++  + V 
Sbjct: 71  DPAYVQTDAYQQFWEHLRKGELIAGTLQRRHVGGATVWLEALCSPILDAQGQLLKVISVA 130

Query: 387 TDMTEQKRARDDLKESHQRLEQQSSLTEM--ILDTLPVMVFVKDEDGRYLVMNEAAAAFV 444
            D++      DD + S+  L   S+L     +++  P  V +   +G YL   E  A  +
Sbjct: 131 ADISAH---IDDSRHSNSIL---SALNRSLGVVELSPEGVILA-ANGNYLKTMEYLAEDL 183

Query: 445 GHDKHEVVGRSDF 457
               H ++  +D+
Sbjct: 184 LGQPHSILCEADY 196