Pairwise Alignments

Query, 868 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 325 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  135 bits (340), Expect = 4e-36
 Identities = 84/225 (37%), Positives = 121/225 (53%), Gaps = 10/225 (4%)

Query: 634 SALGLKTAWSTPIVSPGKEVLGTLSLYFRQGRRPNRFDKDVIEHACRQAAIAIDRNRAMD 693
           S  G +    +P++ P   V+GT+ +Y    ++ N+     ++   RQ    ++  +  +
Sbjct: 101 SGPGYRFYAGSPLIDPEGAVIGTICVYDHVPKQLNQRQISSLQALSRQVIAILELKKVGE 160

Query: 694 SLHRLATVDTLTGLNNRSRFLDQGEAEITRARRLGRSVAVLMLDVDHFKRINDTHGHGAG 753
            LH  +  D LTG+NNR  F  + EAE  R +R G+S  + ++D+DHFK  ND++GH AG
Sbjct: 161 QLHNTSMTDALTGVNNRRAFDLKFEAEFARWQRTGQSFVLALIDIDHFKSFNDSYGHAAG 220

Query: 754 DVALKIVAAIIARELRAIDICGRLGGEEFAVMLPETDGQGAMQAAERLRQAVAQEKVRVA 813
           D AL  VAA+  R  R  D   R GGEEF ++LP TD   A +  E+LR  VA  +  + 
Sbjct: 221 DEALSQVAALFQRHSRNYDFFARYGGEEFVLILPGTDTASANKTLEKLRLVVANHEWLLR 280

Query: 814 EGVELGITVSIGATILAPQDANID--HLLARADGALYEAKRSGRN 856
           +     +TVSIG   LA  D   D   LL  AD  LY+AK  GRN
Sbjct: 281 Q-----LTVSIG---LASADLFDDKKQLLEVADQMLYKAKTQGRN 317