Pairwise Alignments

Query, 388 a.a., diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 454 a.a., GGDEF/response regulator protein PleD from Caulobacter crescentus NA1000

 Score =  100 bits (250), Expect = 6e-26
 Identities = 87/304 (28%), Positives = 137/304 (45%), Gaps = 11/304 (3%)

Query: 8   RILIVDDSRMVRASIIKHLKGHYEIREEGDGEAAWQTLVLDHDIQAVISDLSMPVMDGFD 67
           R+LIVDD+      +   L   +    E D E A   +     +  VI + +    DG  
Sbjct: 155 RVLIVDDNERQAQRVAAELGVEHRPVIESDPEKA--KISAGGPVDLVIVNAAAKNFDGLR 212

Query: 68  LLARIRDSKVSRLRQLPVIMISGEEDEESRDKALALGANDFITKGIGTAELLARVDSLVR 127
             A +R  +  R RQLPV+ +   +D     KAL +G ND +++ I   EL ARV + ++
Sbjct: 213 FTAALRSEE--RTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQ 270

Query: 128 LGQAEQALHSHQDQQLR----HPHSGLFTRAYLEAQAEQALSLAGRQQAPASVLVLGFDS 183
             +    L ++ D  L        +GL  R Y+  Q +  +  A     P S L++  D 
Sbjct: 271 RKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDF 330

Query: 184 LERYTAQYGGALVDKLQERFAKLLAGNIRKEDSLGHYSDTTFAIVSPGTPGAASEAFANR 243
            ++    +G  + D++   FA  LA N+R  D    Y    F ++ P T  A +   A R
Sbjct: 331 FKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAER 390

Query: 244 LRHAVETSNIAV-HG-QRLPLTISIGIASFPLDGAPSATSLLAMAEARRAAAAAAGGNRA 301
           +R  V  S   V HG + L +TISIG+++   +G  +  +LL  A+     A A+G N  
Sbjct: 391 IRMHVSGSPFTVAHGREMLNVTISIGVSATAGEG-DTPEALLKRADEGVYQAKASGRNAV 449

Query: 302 VAPA 305
           V  A
Sbjct: 450 VGKA 453



 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 4/121 (3%)

Query: 8   RILIVDDSRM-VRASIIKHLKGHYEIREEGDGEAAWQTLVLDHDIQAVISDLSMPVMDGF 66
           RIL+VDD    VR    K    +YE+    DG  A      D     ++ D+ MP MDGF
Sbjct: 4   RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLP-DIILLDVMMPGMDGF 62

Query: 67  DLLARIRDSKVSRLRQLPVIMISGEEDEESRDKALALGANDFITKGIGTAELLARVDSLV 126
            +  +++D   +R   +PV++I+  +    R + L  GA+DF+TK I    L ARV SL 
Sbjct: 63  TVCRKLKDDPTTR--HIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLT 120

Query: 127 R 127
           R
Sbjct: 121 R 121