Pairwise Alignments

Query, 655 a.a., tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein from Dechlorosoma suillum PS

Subject, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

 Score =  321 bits (822), Expect = 8e-92
 Identities = 226/661 (34%), Positives = 321/661 (48%), Gaps = 38/661 (5%)

Query: 26  ARLCRNDAGVPYSPDYDDIYHTAAGALGQARHVFLAGNGLPRRWQQRES--FTIVETGFG 83
           A+L  NDAG P S  +DD+Y +    L + R+VFL  N LP+RW   +   F I ETGFG
Sbjct: 10  AQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIAETGFG 69

Query: 84  IGLNFLATWAAW-----RDDPAACRRLHFVSLEKHPFSAADLGELHAAHPELAELAAELR 138
            GLNFLA W A+      +  A  + LHF+S EK+P S +DL + H A PELA+ A +L 
Sbjct: 70  TGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFAQKLH 129

Query: 139 AQWPLLTPGVHRLHFAGGRVSLTLFFGDAQSLLPQLRLA----ADAFYLDGFAPAKNPDL 194
             +PL  P   R+    G V+L L+FGD +  LP++        DA++LDGFAP+KNP++
Sbjct: 130 KHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSKNPEM 189

Query: 195 WSPFVFRGLARCAAAGATLATWSVAAGVREGLQAVGFVSDKAPGFGGKRDMLQGQYR--- 251
           W+  +F G+A+ A  G T AT++ A  VR GL   GF   K  GFG KR+M+ G      
Sbjct: 190 WNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGSLSEKV 249

Query: 252 -----GPGVRRTVMPG-KRILVIGAGFAGTSTAHRLAERGYQVTLLDQAEGPGCGASGNR 305
                 P  R     G + + +IG G A  + A  LA RG  VTL    E P  GASGNR
Sbjct: 250 PYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQGASGNR 309

Query: 306 VGVLRPLPSLDDNRLSRLTRSAFLYTRRHL-LALSAAGLPVRWGASGVLHLARDKTHEAT 364
            G + PL S D N +SR+   AFL+ R+ +  A         W   GV  L  D+     
Sbjct: 310 QGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDW--CGVTQLMWDEKATDK 367

Query: 365 QRQVAETFAAPELFRYVDATESSRLIGWPVSVGGWHFPGGGWGMPPSLCQA---NLQAHP 421
            + + E     +L   + A ++++ +G PV     H+P GGW  P  L Q     L+   
Sbjct: 368 LKSMLEGNFPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQGLIHLLEQQG 427

Query: 422 AIEQRYGQRVEKLEAGADGWAAYAADGTLLAEADQVVLANAADARRLGGCDWLPLRSARG 481
            +   Y   ++ L    +        G  L     VV+A+      L     LPL   +G
Sbjct: 428 KLTAHYQTPIDALTWQPETQLWQLRSGDTLMSHQCVVIASGHQFDSLSQTAELPLGKVKG 487

Query: 482 QATLVPETAT-PPLDMVVCRLGYVTP--PLDGLRVCGASFLAGDEDPLPRLEEQQDNLAK 538
           Q + +P T T   ++ V+C  GY+TP    +G    GAS+     D     + Q +N  K
Sbjct: 488 QVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATFDPQAQHENAQK 547

Query: 539 LNFILPGFAKDLAAADLG--SRVGFRPISPDRLPMLGPLPENT-------TPATGARLQT 589
           L   LP     L     G  SR G R +S D LP +G + E +         A   + + 
Sbjct: 548 LIHCLPEQTWPLEVDVSGNQSRQGVRCVSRDHLPFVGNVGEFSKITEQYRDLAQQHQAEP 607

Query: 590 LPRRPGLWLASGFGARGFVWSAWAGEFLASQIAGDPLPLEGDLADALDPARFLLKPVKAA 649
           +   P L+   G G+RG   +    E LASQ+ GDP+PL  DL + L P+R  ++ ++  
Sbjct: 608 IALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLGVDLLEQLHPSRMWVRKLRKG 667

Query: 650 R 650
           +
Sbjct: 668 K 668