Pairwise Alignments

Query, 490 a.a., transcription termination factor NusA from Dechlorosoma suillum PS

Subject, 493 a.a., Transcription termination protein NusA from Pseudomonas fluorescens FW300-N2E2

 Score =  538 bits (1387), Expect = e-157
 Identities = 275/493 (55%), Positives = 373/493 (75%), Gaps = 3/493 (0%)

Query: 1   MSREILLLVDALAREKNVAKDVVFGALESALASATKKRINDEADVRVVIDRNTGEYESFR 60
           MS+E+LL+V++++ EK V  +V+F ALE ALA+ATKKR  DE D+RV I+R+TG YE+FR
Sbjct: 1   MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR 60

Query: 61  RWQVVADETYVNEFLEMPLSEAQKQDEGVEVGDVIEESLEPIDFGRIGAQAAKQVILQRI 120
           RW VV +    +  +E   S+  +   G +VGDV+EE +E I+FGRI AQ AKQVI+Q++
Sbjct: 61  RWTVVEEADLDDPAIETWPSKVAETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKV 120

Query: 121 RDAEREQILADFLERKEHIVSGTIKRMERGNAIIEAGK-IEALLPRDQMIPKENLRVGDR 179
           R+AER Q++  + ER   I+SGT+K++ R N I++ G   EALL R+ +I +E  RVG R
Sbjct: 121 REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR 180

Query: 180 VKAFLLRIDRNARGPQIILSRTAPEFIIKLFDLEVPEIEDGLMEIKAAARDPGMRAKIAV 239
           ++A L  I    RGPQ+ILSRTAPE +I+LF +EVPEI +GL+E+ AA+RDPG RAKIAV
Sbjct: 181 LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV 240

Query: 240 KSNDPRVDPIGTCVGMRGTRVTAVTNELAGERVDIVHWSQDPAQFVIGALAPAEVSSIVV 299
           +S D R+DP G C+GMRG+RV AV+ EL GERVDIV W  +PAQFVI A++PAEV++I+V
Sbjct: 241 RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV 300

Query: 300 DEEKHSMDVVVDEANLAIAIGRGGQNVRLASELTGWNINLMTQEESEKKVEAETAATRVL 359
           DE+ H+MD+ V   NLA AIGRGGQNVRLAS+LTGW +N+MT+ + + K +AET      
Sbjct: 301 DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN 360

Query: 360 FMEKLDVDEEVANILIDEGFSTLEEVAYVPLAEMLEIEAFDEDTVNELRNRARNVLLTEA 419
           F+E+L+VDEE+A +L+DEGF++LEE+AYVP+ EML I+ FDE+ VNELR RA++ LLT+A
Sbjct: 361 FIEELEVDEELAQVLVDEGFTSLEEIAYVPVEEMLNIDGFDEEIVNELRARAKDRLLTKA 420

Query: 420 IVTEEQLEGVE--DSLLALDGMDKSLAAKLASGGVKTLDDLADLAVDELTEITGIDADRA 477
           I TEE+L      + LL+L+GMDK LA +LA  GV T +DLA+ ++D+L +I GID DRA
Sbjct: 421 IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA 480

Query: 478 KQLITNARSHWFE 490
            +LI  AR+HWFE
Sbjct: 481 GKLIMAARAHWFE 493