Pairwise Alignments

Query, 490 a.a., transcription termination factor NusA from Dechlorosoma suillum PS

Subject, 503 a.a., Transcription termination protein NusA from Xanthomonas campestris pv. campestris strain 8004

 Score =  526 bits (1355), Expect = e-154
 Identities = 274/494 (55%), Positives = 370/494 (74%), Gaps = 9/494 (1%)

Query: 1   MSREILLLVDALAREKNVAKDVVFGALESALASATKKRINDEADV--RVVIDRNTGEYES 58
           MS+E+LL+VDA+A EK V ++V+F A+E+ALASA KKR  D+ DV  RV ID   G YE+
Sbjct: 1   MSKELLLVVDAVANEKGVPREVIFDAIEAALASAAKKRYPDQ-DVLTRVTIDHKDGNYET 59

Query: 59  FRRWQVVADETYVNE-FLEMPLSEAQKQDEGVEVGDVIEESLEPIDFGRIGAQAAKQVIL 117
           FRRW+VVAD+  +     ++ L +A ++ +GV+VGD +EE +E  DFGRI AQAAKQVI+
Sbjct: 60  FRRWEVVADDVVMESPDRQVRLMDAIEEADGVDVGDYVEEQIENPDFGRIAAQAAKQVIV 119

Query: 118 QRIRDAEREQILADFLERKEHIVSGTIKRMERGNAIIE-AGKIEALLPRDQMIPKENLRV 176
           QR+R+AER+Q++  + +R   +++G +KR ERGN  ++  G  EA +P+D+ IP++ LR 
Sbjct: 120 QRVREAERQQVVDAWKDRVGELITGVVKRAERGNIFVDLGGNAEAFIPKDKGIPRDVLRP 179

Query: 177 GDRVKAFLLRIDRNARGPQIILSRTAPEFIIKLFDLEVPEIEDGLMEIKAAARDPGMRAK 236
           GDRV+ +L  +    RGPQ+ +SR APEF+I+LF LEVPE+  GL+EIKA ARDPG RAK
Sbjct: 180 GDRVRGYLAEVRSEPRGPQLFISRAAPEFMIELFKLEVPEVGQGLVEIKACARDPGDRAK 239

Query: 237 IAVKSNDPRVDPIGTCVGMRGTRVTAVTNELAGERVDIVHWSQDPAQFVIGALAPAEVSS 296
           IAV ++D R DPIG C+GMRG+RV AV+NEL GERVDIV W+++PA FVI A+APAEV S
Sbjct: 240 IAVIAHDTRTDPIGACIGMRGSRVQAVSNELNGERVDIVLWNENPANFVINAMAPAEVQS 299

Query: 297 IVVDEEKHSMDVVVDEANLAIAIGRGGQNVRLASELTGWNINLMTQEESEKKVEAETAAT 356
           I+VDE+KHSMD+ V E  LA AIG+GGQNVRLAS LTGW +N+MT ++   K EAE A+ 
Sbjct: 300 IIVDEDKHSMDLAVAEDRLAQAIGKGGQNVRLASRLTGWQLNVMTADQVAAKSEAEQASA 359

Query: 357 RVLFMEKLDVDEEVANILIDEGFSTLEEVAYVPLAEMLEIEAFDEDTVNELRNRARNVLL 416
           R LFM++L+VDEE++ IL+ EGF+T+EE+AYVP+ E+L +E FDED V ELR RAR+ L+
Sbjct: 360 RQLFMDRLEVDEEISAILVSEGFNTVEEIAYVPVGELLAVEGFDEDIVEELRARARDALV 419

Query: 417 TEAIVTEEQLEGVE--DSLLALDGMDKSLAAKLASGGVKTLDDLADLAVDELTE--ITGI 472
             A+  EE LEG +  + LLAL+GMD+  A  LA  GV+T +DL+DLA DE+ +  I G+
Sbjct: 420 NAALAEEEGLEGTQPTEDLLALEGMDEETAFALAEHGVRTSEDLSDLAADEIVDFGIEGM 479

Query: 473 DADRAKQLITNARS 486
             +RA  LI  AR+
Sbjct: 480 TQERAAALILAARA 493