Pairwise Alignments

Query, 490 a.a., transcription termination factor NusA from Dechlorosoma suillum PS

Subject, 499 a.a., transcription termination factor NusA from Dyella japonica UNC79MFTsu3.2

 Score =  547 bits (1410), Expect = e-160
 Identities = 278/493 (56%), Positives = 371/493 (75%), Gaps = 3/493 (0%)

Query: 1   MSREILLLVDALAREKNVAKDVVFGALESALASATKKRINDE-ADVRVVIDRNTGEYESF 59
           MS+E+LL+VDA+A EK V ++V+F A+E+ALASA KKR  DE  ++RV IDR  GEYE+F
Sbjct: 1   MSKELLLVVDAVANEKGVPREVIFQAMEAALASAAKKRYPDEDPNIRVSIDRQNGEYETF 60

Query: 60  RRWQVVADETYVNE-FLEMPLSEAQKQDEGVEVGDVIEESLEPIDFGRIGAQAAKQVILQ 118
           RRW+++AD+  +   + ++ L +A  + E  ++G+ IE  +E  +FGRI AQAAKQVI+Q
Sbjct: 61  RRWEIIADDGEMESPYHQLRLMDAVDEREDAQIGEYIETQIENAEFGRIAAQAAKQVIVQ 120

Query: 119 RIRDAEREQILADFLERKEHIVSGTIKRMERGNAIIE-AGKIEALLPRDQMIPKENLRVG 177
           R+R+AER+Q++  + +R   +++G +KR+ERGN  ++  G  EA +PRD+ IP+E+ RVG
Sbjct: 121 RVREAERQQVVDAYKDRVGELITGIVKRVERGNVYLDLGGNAEAFIPRDKTIPRESHRVG 180

Query: 178 DRVKAFLLRIDRNARGPQIILSRTAPEFIIKLFDLEVPEIEDGLMEIKAAARDPGMRAKI 237
           DRV+ +L  +    RGPQ+ +SR APEF+I+LF LEVPE+  GL+EIK  ARDPG RAKI
Sbjct: 181 DRVRGYLAEVKSEIRGPQLFVSRAAPEFMIELFKLEVPEVGQGLVEIKGCARDPGDRAKI 240

Query: 238 AVKSNDPRVDPIGTCVGMRGTRVTAVTNELAGERVDIVHWSQDPAQFVIGALAPAEVSSI 297
           AV ++D R DPIG C+GMRG+RV AV+NEL GERVDI+ W ++ AQ+VI A+APAEV SI
Sbjct: 241 AVVAHDSRTDPIGACIGMRGSRVQAVSNELNGERVDIITWHENQAQYVINAMAPAEVQSI 300

Query: 298 VVDEEKHSMDVVVDEANLAIAIGRGGQNVRLASELTGWNINLMTQEESEKKVEAETAATR 357
           ++DEEKHSMD+ V E  L+ AIGRGGQNVRLAS+LTGW +N+MTQ++   K EAE  A R
Sbjct: 301 IMDEEKHSMDIAVAEDKLSQAIGRGGQNVRLASKLTGWQLNVMTQDQVAAKSEAEQEAAR 360

Query: 358 VLFMEKLDVDEEVANILIDEGFSTLEEVAYVPLAEMLEIEAFDEDTVNELRNRARNVLLT 417
            LFMEKL+VD+E+ANIL+ EGFS++EE+AYVP AE+L +E FDED V ELR RAR+ LLT
Sbjct: 361 QLFMEKLEVDQEIANILVQEGFSSIEEIAYVPSAELLAVEGFDEDIVEELRARARDALLT 420

Query: 418 EAIVTEEQLEGVEDSLLALDGMDKSLAAKLASGGVKTLDDLADLAVDELTEITGIDADRA 477
           EA+  EE +    + LLAL GM +S+A  LA   V TLDDLADLAVD+L +I G+D D A
Sbjct: 421 EALAVEEGVNEPSEELLALPGMSESIAYALAEREVATLDDLADLAVDDLIDIEGVDEDLA 480

Query: 478 KQLITNARSHWFE 490
            +LI  AR    E
Sbjct: 481 AKLIMEARKPMIE 493