Pairwise Alignments

Query, 490 a.a., transcription termination factor NusA from Dechlorosoma suillum PS

Subject, 491 a.a., NusA antitermination factor from Paraburkholderia bryophila 376MFSha3.1

 Score =  654 bits (1688), Expect = 0.0
 Identities = 335/491 (68%), Positives = 409/491 (83%), Gaps = 1/491 (0%)

Query: 1   MSREILLLVDALAREKNVAKDVVFGALESALASATKKRINDEADVRVVIDRNTGEYESFR 60
           MSRE+L+LVDALAREKNV KDVVF ALE+ALASA+KK  +++AD+RV IDR +GE+E+FR
Sbjct: 1   MSREVLMLVDALAREKNVDKDVVFAALEAALASASKKLFDEDADIRVHIDRESGEHETFR 60

Query: 61  RWQVVADETYVNE-FLEMPLSEAQKQDEGVEVGDVIEESLEPIDFGRIGAQAAKQVILQR 119
           RW+VV DE  + E   E+ L EA++Q   +++ + IEE +  I+FGRIGAQAAKQVILQ+
Sbjct: 61  RWKVVPDEAGLQEPDQEILLFEAREQKPEIQLDEYIEEPVPSIEFGRIGAQAAKQVILQK 120

Query: 120 IRDAEREQILADFLERKEHIVSGTIKRMERGNAIIEAGKIEALLPRDQMIPKENLRVGDR 179
           +RDAEREQIL DFLER EHI++G++KR+++GN I+E G++EALL RDQ+IPKENLRVGDR
Sbjct: 121 VRDAEREQILNDFLERGEHIMTGSVKRLDKGNFIVETGRVEALLRRDQLIPKENLRVGDR 180

Query: 180 VKAFLLRIDRNARGPQIILSRTAPEFIIKLFDLEVPEIEDGLMEIKAAARDPGMRAKIAV 239
           V+A++ ++DR ARGPQI LSRTAPEF++KLF++EVPEIE GL+EIKAAARDPG+RAKI V
Sbjct: 181 VRAYIAKVDRTARGPQIELSRTAPEFLMKLFEMEVPEIEQGLLEIKAAARDPGVRAKIGV 240

Query: 240 KSNDPRVDPIGTCVGMRGTRVTAVTNELAGERVDIVHWSQDPAQFVIGALAPAEVSSIVV 299
            + D R+DPIGTCVG+RG+RV AV NEL GE VDIV WS+DPAQFVIGALAPA V SIVV
Sbjct: 241 VAYDKRIDPIGTCVGIRGSRVQAVRNELGGENVDIVLWSEDPAQFVIGALAPAAVQSIVV 300

Query: 300 DEEKHSMDVVVDEANLAIAIGRGGQNVRLASELTGWNINLMTQEESEKKVEAETAATRVL 359
           DEEKHSMDVVVDE  LA+AIGR GQNVRLASELTGW IN+MT +ES +K   E    R L
Sbjct: 301 DEEKHSMDVVVDENELAVAIGRSGQNVRLASELTGWQINIMTPDESAQKQNQERGVLRDL 360

Query: 360 FMEKLDVDEEVANILIDEGFSTLEEVAYVPLAEMLEIEAFDEDTVNELRNRARNVLLTEA 419
           FM +LDVDEEVA+ILIDEGF++LEE+AYVPL EMLEIEAFDEDTV+ELRNR+R+ LLT A
Sbjct: 361 FMARLDVDEEVADILIDEGFTSLEEIAYVPLNEMLEIEAFDEDTVHELRNRSRDALLTMA 420

Query: 420 IVTEEQLEGVEDSLLALDGMDKSLAAKLASGGVKTLDDLADLAVDELTEITGIDADRAKQ 479
           I  EE++E V   L +LDGMD  L AKLA   ++T D+LA+LAVDEL E+TG++ D AK 
Sbjct: 421 IANEEKVENVALDLKSLDGMDADLLAKLAEHQIQTRDELAELAVDELVEMTGMEEDAAKA 480

Query: 480 LITNARSHWFE 490
           LI  AR HWF+
Sbjct: 481 LIMKAREHWFQ 491