Pairwise Alignments

Query, 300 a.a., tRNA pseudouridine 55 synthase from Dechlorosoma suillum PS

Subject, 305 a.a., tRNA pseudouridine 55 synthase from Pseudomonas stutzeri RCH2

 Score =  285 bits (729), Expect = 9e-82
 Identities = 162/305 (53%), Positives = 200/305 (65%), Gaps = 8/305 (2%)

Query: 1   MSKPRRTWKQVDGVLLLDKPLHLSSNDALQKARRFFSAAKAGHTGTLDPLATGLLPICFG 60
           M++ +R  + V+G++LLDKP   +SN ALQK R   +A KAGHTG+LDPLATG+LP+CFG
Sbjct: 1   MAQVKRVRRNVNGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG 60

Query: 61  EATKFSADLLDADKAYVADVRLGQTTATGDAEGEILQTRPVQVSAEQLAAVLPRFTGVIA 120
           EATKFS  LLDADKAY   ++LG TT T DAEGE+L+ +PV V+ EQL A+LP+F G I 
Sbjct: 61  EATKFSQYLLDADKAYETVMQLGVTTTTADAEGEVLERKPVAVTVEQLEALLPQFRGDIL 120

Query: 121 QVPPMYSALKRDGKPLYELARQGLEVEREAREVTILSLAASDFDGVNFRLHVDCSKGTYI 180
           QVPPMYSALKRDG+PLY+LAR G  VERE R V I  L     +G   RL V CSKGTYI
Sbjct: 121 QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVNIARLELLSLEGDKARLAVSCSKGTYI 180

Query: 181 RTLAEDIGEALGCGAHLTGLRRTRVGPLELDRAVSLAELENTEEADRGR----YLLPVDA 236
           RTL ED+G  LGCGAH+  LRRT+ GP +L + V+L  LE              L PVD+
Sbjct: 181 RTLVEDLGHLLGCGAHVAELRRTQAGPFDLSQTVTLETLEQLHSEGGAEALDALLQPVDS 240

Query: 237 LLRSLPEVLLEAESLQRFAHGNPV-ATEL-QSGKARVY-GEGVLQGVGEVRE-GKLWPYR 292
            L   P + L   S   + HG PV A E  + G  RV    G   G+GEV E G++ P R
Sbjct: 241 GLEHWPLLQLSEHSAYYWLHGQPVRAPEAPKYGMVRVQDNNGRFIGIGEVSEDGRIAPRR 300

Query: 293 LLRQK 297
           L+R +
Sbjct: 301 LIRSE 305