Pairwise Alignments

Query, 300 a.a., tRNA pseudouridine 55 synthase from Dechlorosoma suillum PS

Subject, 311 a.a., tRNA pseudouridine synthase B from Sinorhizobium meliloti 1021

 Score =  207 bits (526), Expect = 3e-58
 Identities = 124/309 (40%), Positives = 176/309 (56%), Gaps = 18/309 (5%)

Query: 1   MSKPRRT-WKQVDGVLLLDKPLHLSSNDALQKARRFFSAAKAGHTGTLDPLATGLLPICF 59
           MS+PR+   + + G L+LDKPL   S +A+ K +  F A KAGH GTLDPLA+G+LPI  
Sbjct: 1   MSRPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL 60

Query: 60  GEATKFSADLLDADKAYVADVRLGQTTATGDAEGEILQTRPVQVSAEQLAAVLPRFTGVI 119
           G+ATK    ++D  K Y   V  G+  +T D EGE +++   +   E + A+LP++TGVI
Sbjct: 61  GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGEAVRSSAARPEEEAIRALLPKYTGVI 120

Query: 120 AQVPPMYSALKRDGKPLYELARQGLEVEREAREVTI--LSLAASDFDGVNFRLHVDCSKG 177
           AQVPP +SA+K  G+  Y+LAR G  VE  AREV +  LSL  S  +  +F   ++C KG
Sbjct: 121 AQVPPQFSAIKIGGERAYDLARDGETVEIPAREVEVFRLSLIGSAPNLAHF--EIECGKG 178

Query: 178 TYIRTLAEDIGEALGCGAHLTGLRRTRVGPLELDRAVSLAELENTE----EADR----GR 229
           TY+R+LA D+G  LGC  H+  LRRT V P   +  V LA+L   E    +A+R      
Sbjct: 179 TYVRSLARDMGRDLGCFGHIASLRRTFVAPFGEEDMVPLADLVALEAIEDDAERLAALDA 238

Query: 230 YLLPVDALLRSLPEVLLEAESLQRFAHGNPVA-----TELQSGKARVYGEGVLQGVGEVR 284
           YL+     L  LP + +  +   R   GNP+        L + +A    +G L  +GE+ 
Sbjct: 239 YLIDTGEALSDLPHIAVNDDQAHRLRMGNPIILRGRDAPLPTPEAYATAQGKLVAIGEIA 298

Query: 285 EGKLWPYRL 293
           EG+  P R+
Sbjct: 299 EGEFRPKRV 307