Pairwise Alignments

Query, 300 a.a., tRNA pseudouridine 55 synthase from Dechlorosoma suillum PS

Subject, 301 a.a., tRNA pseudouridine synthase B from Phaeobacter inhibens DSM 17395

 Score =  204 bits (519), Expect = 2e-57
 Identities = 120/295 (40%), Positives = 172/295 (58%), Gaps = 6/295 (2%)

Query: 5   RRTWKQVDGVLLLDKPLHLSSNDALQKARRFFSAAKAGHTGTLDPLATGLLPICFGEATK 64
           +R  + + G L++DKP  L+S   + K R  F A KAGH GTLDP ATG+L +  GEATK
Sbjct: 4   KRKGRDISGWLVVDKPAGLTSTAVVNKVRWAFDAKKAGHAGTLDPEATGVLAVALGEATK 63

Query: 65  FSADLLDADKAYVADVRLGQTTATGDAEGEILQTRPVQVSAEQLAAVLPRFTGVIAQVPP 124
               + DA KAY   VRLGQ T T DAEGE++     + S +++ A LP+F G I QVPP
Sbjct: 64  TVPYITDALKAYTFTVRLGQATNTDDAEGEVIARSETRPSDDEIVAALPQFLGDIMQVPP 123

Query: 125 MYSALKRDGKPLYELARQGLEVEREAREVTILSLAASDF-DGVNFRLHVDCSKGTYIRTL 183
            +SA+K DG+  Y+LAR G E+E  AR + +  L   D  D  +  L + C KG Y+R++
Sbjct: 124 KFSAVKIDGQRAYKLARDGEEIELAARPLWVEELILVDRPDDDHVVLEMTCGKGGYVRSI 183

Query: 184 AEDIGEALGCGAHLTGLRRTRVGPLELDRAVSLAEL-ENTEEADRGRYLLPVDALLRSLP 242
           A D+G ALGC  H+  LRRT  GP + +  +SL  L E  +  D   YL P++  L  LP
Sbjct: 184 ARDLGAALGCHGHVKCLRRTWSGPFDAEDGISLETLDEMAKSPDLDGYLRPLEEGLADLP 243

Query: 243 EVLLEAESLQRFAHGNP---VATELQSG-KARVYGEGVLQGVGEVREGKLWPYRL 293
           ++    E   +  +GNP   +A++++ G +A    +G+   VG  + G+L P R+
Sbjct: 244 QLTCTPEGAAKLRNGNPGMVLASDVEYGDEAWASLDGLAIAVGHYKSGELHPSRV 298