Pairwise Alignments

Query, 330 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 364 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score =  224 bits (571), Expect = 3e-63
 Identities = 125/328 (38%), Positives = 177/328 (53%), Gaps = 4/328 (1%)

Query: 1   MQRRDFLLGAGASAALGAAT---ARAADGQPVVRWRLASSYPKSLDTLYGASEVLANRVA 57
           M RR+FL  + A+A  G +    +R A         + +++PK    L  ++  LA RV 
Sbjct: 1   MDRREFLSASAAAATGGLSLDGLSRPALANGAKTLTMVTTWPKDYVGLGESASRLAARVR 60

Query: 58  ALTEGRFQIRPFAAGEIVPGLQALDAVQQDTVECGHTLGSFYVGKNRAFAFDSVLPFGLT 117
            ++ GR  I  +AAGE+VP  +A +AV   T +  H   +++  ++ AF F   +PFGLT
Sbjct: 61  TMSGGRLSITVYAAGELVPAFEAFEAVANGTADLYHGAETYWESRSSAFNFFCAVPFGLT 120

Query: 118 TRQQTAWMHFGNGLTLLRELYRDYGVINFPGGNTGAQMGGWFRKELQGLADLKGLKMRIP 177
             + +AW+H G    L   L   YG+       TG QMGGWF KE++ + D KGL+MRIP
Sbjct: 121 AIETSAWIHHGGAQALWDALSAPYGIKPMLASATGVQMGGWFNKEIKRVEDFKGLRMRIP 180

Query: 178 GLGGEIMARLGAVPQTIPGADVYPALEKGAIDAAEWSGPYDDEKLGFFKVARYYYHPGWW 237
           GLG  I+  +GAVP  +PG+ ++ AL  GAIDAAEW GP+ D  L   KVARYYY+PG+ 
Sbjct: 181 GLGARILKEVGAVPVALPGSQIHDALRDGAIDAAEWIGPWSDLALDLQKVARYYYYPGFH 240

Query: 238 EPSAQLSFLVNAREWEKLPKAYQQAFEVAAAEAHLLTTAEYDAKNPPALTRLLA-QGVKL 296
           EP   L+  +N   W  L    +   E A    H  + AEY+A+N  AL  L+   GV+L
Sbjct: 241 EPGTSLAVGINLGVWRGLSDQERAIIEAACGAEHAFSLAEYNARNGDALHTLVTNHGVQL 300

Query: 297 RRFPDDVMKAAYRAAFAFYERVGRESSE 324
           R FP  V+    + A         +S E
Sbjct: 301 RAFPTQVLLELGKTAGRVVRAAAADSPE 328