Pairwise Alignments

Query, 330 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 396 a.a., TRAP-type D-lactate transporter, periplasmic component (from data) from Marinobacter adhaerens HP15

 Score =  101 bits (252), Expect = 3e-26
 Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 17/325 (5%)

Query: 3   RRDFLLGAGASAAL-GAATARAADGQPVVRWRLASSYPKSLDTLYGASEVLANRVAALTE 61
           RR FL      A L GA    A   Q    W++ S++       Y   E     + A + 
Sbjct: 40  RRSFLKTIAMGATLAGAMLMGAGQAQAATTWKIQSTWDAGT-VGYTLFEEWCKSIEAKSG 98

Query: 62  GRFQIRPFAAGEIVPGLQAL-DAVQQDTVECGHTLGSFYVGKNRAFAFDSVLPFGLTTRQ 120
           G  + + F A  +     AL DAV+   ++  +    ++ GK  A  F S  P G     
Sbjct: 99  GELKFQCFPAKAVAADNNALFDAVRNGVLQGMNPFTLYWAGKIPASVFLSSYPAGPDQPH 158

Query: 121 QTAWMHFGNG-LTLLRELYRDYGVINFPGGNTGAQMGGWFRKELQGLADLKGLKMRIPG- 178
           Q   M +  G L   RE+Y+ +G+         A +    ++ +  L DLKG+K+R+PG 
Sbjct: 159 QWDTMFYSMGMLEKTREIYKKFGLFYVGPIQHDANIIH-SKQPVNSLDDLKGMKIRVPGG 217

Query: 179 LGGEIMARLGAVPQTIPGADVYPALEKGAIDAAEWSGPYDDEKLGFFKVARY--YYHPG- 235
           +  E+  + G    ++PG+D++PALEKG IDAA++ GP  + +LGF +V  Y  +  PG 
Sbjct: 218 MVAEVFQQFGVSTVSLPGSDIFPALEKGTIDAADFVGPAVNYELGFSQVTDYIIFGPPGV 277

Query: 236 --WWEPSAQLSFLVNAREWEKLPKAYQQAFEVAAAEAHLLTTAEY---DAKNPPALTRLL 290
              ++P   +   V+ R W  +    QQ  E    E  + +   Y    A+N  A+ +  
Sbjct: 278 MSIYQPVDLMDLTVSLRAWNSISPELQQLVE---DEVRIYSQKHYLAIQARNIEAMEKFK 334

Query: 291 AQGVKLRRFPDDVMKAAYRAAFAFY 315
           A G  + R   + ++   +AA   +
Sbjct: 335 ADGDTVTRLSQEDLETWRKAAIPIW 359